RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 H7BYZ3 331 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 TRGC1P0CF51 173 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 ARR3P36575 388 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 FFAR4Q5NUL3 377 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 RCC1LQ96I51 464 aaKnown RBP10.07□□□□□ -0.8
XRCC3-208ENST00000554811 PATZ1Q9HBE1 687 aaKnown RBP10.07□□□□□ -0.8
XRCC3-208ENST00000554811 YLPM1P49750 1951 aaKnown RBP10.07□□□□□ -0.8
XRCC3-208ENST00000554811 NCKAP5O14513 1909 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 UCP1P25874 307 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 MPLP40238 635 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 WNT5AP41221 380 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 RIPPLY2Q5TAB7 128 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 H2BFWTQ7Z2G1 175 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 FGFRL1Q8N441 504 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 OR5A2Q8NGI9 324 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 LEAP2Q969E1 77 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 GFOD1Q9NXC2 390 aa10.07□□□□□ -0.8
XRCC3-208ENST00000554811 SH2D1BO14796 132 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 NEURL1O76050 574 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 AGAP20933 346 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 SSTR5P35346 364 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 MDH2P40926 338 aaKnown RBP10.06□□□□□ -0.8
XRCC3-208ENST00000554811 PPP1CBP62140 327 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 TMEM42Q69YG0 159 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 ABLIM2Q6H8Q1 611 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 ZNF66Q6ZN08 573 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 SCCPDHQ8NBX0 429 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 NANOS1Q8WY41 292 aaKnown RBP10.06□□□□□ -0.8
XRCC3-208ENST00000554811 PRDM14Q9GZV8 571 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 ZNF703Q9H7S9 590 aaPredicted RBP10.06□□□□□ -0.8
XRCC3-208ENST00000554811 H0Y980 276 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 SPINK4O60575 86 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 UCP3P55916 312 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 C1orf210Q8IVY1 113 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 DRAM1Q8N682 238 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 CLDND2Q8NHS1 167 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 RNF138Q8WVD3 245 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 MEGF10Q96KG7 1140 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 HEYLQ9NQ87 328 aaPredicted RBP10.06□□□□□ -0.8
XRCC3-208ENST00000554811 LIN7CQ9NUP9 197 aaKnown RBP10.06□□□□□ -0.8
XRCC3-208ENST00000554811 TECTAO75443 2155 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 ZFHX4Q86UP3 3567 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 LRP5LA4QPB2 252 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 CLDN34H7C241 214 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 UBE2CO00762 179 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 PAGE4O60829 102 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 ZG16O60844 167 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 BCL2P10415 239 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 LHX2P50458 406 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 CASP6P55212 293 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 ELOBQ15370 118 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 MUCL1Q96DR8 90 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 POM121Q96HA1 1249 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 RAB40CQ96S21 281 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 TMEM9BQ9NQ34 198 aa10.06□□□□□ -0.8
XRCC3-208ENST00000554811 IGHV3OR15-7A0A075B7D8 119 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 A0A1W2PPV4 95 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 IGHEP01854 428 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 CD46P15529 392 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 PSMB3P49720 205 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 FAM3BP58499 235 aaPredicted RBP10.05□□□□□ -0.8
XRCC3-208ENST00000554811 NMSQ5H8A3 153 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HEPN1Q6WQI6 88 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 SSX7Q7RTT5 188 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 MRPL41Q8IXM3 137 aaKnown RBP10.05□□□□□ -0.8
XRCC3-208ENST00000554811 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
XRCC3-208ENST00000554811 TRGV5A0A0B4J1U4 118 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 PGPEP1LA6NFU8 196 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 FCGR3BO75015 233 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 S1PR2O95136 353 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 ID3Q02535 119 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 ZFP36L1Q07352 338 aaKnown RBP10.05□□□□□ -0.8
XRCC3-208ENST00000554811 FOXO1Q12778 655 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 GAMTQ14353 236 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 PYY3Q5JQD4 70 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
XRCC3-208ENST00000554811 OR10P1Q8NGE3 313 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 OR5D13Q8NGL4 314 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 OR13D1Q8NGV5 346 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 OR5P3Q8WZ94 311 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 GALMQ96C23 342 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 TMEM56Q96MV1 263 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 TMEM56-RWDD3S4R434 201 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 DCHS1Q96JQ0 3298 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 TRAV38-1A0A0B4J264 116 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 KLRC4-KLRK1H3BQV0 150 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 CLDN18P56856 261 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 FOXL2NBQ6ZUU3 175 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
XRCC3-208ENST00000554811 OR10G4Q8NGN3 311 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms