RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 ZNF525Q8N782 197 aa13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 UNKLQ9H9P5 680 aaKnown RBP13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 RBMXL2O75526 392 aaKnown RBP13.21□□□□□ -0.3
ARHGEF40-203ENST00000554514 HBE1P02100 147 aa13.21□□□□□ -0.3
ARHGEF40-203ENST00000554514 CEACAM1P13688 526 aa13.21□□□□□ -0.3
ARHGEF40-203ENST00000554514 PLA2G2CQ5R387 149 aa13.21□□□□□ -0.3
ARHGEF40-203ENST00000554514 Q8IYB0 196 aa13.21□□□□□ -0.3
ARHGEF40-203ENST00000554514 KDF1Q8NAX2 398 aaPredicted RBP13.21□□□□□ -0.3
ARHGEF40-203ENST00000554514 ZNF674Q2M3X9 581 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 VWA1Q6PCB0 445 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 SNIP1Q8TAD8 396 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 LSM10Q969L4 123 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 RBMXL1Q96E39 390 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 C12orf77C9JDV5 145 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 UBE2CO00762 179 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 MLNRO43193 412 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 CD55P08174 381 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 HOXC12P31275 282 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 RPL30P62888 115 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 ZNF726P1Q15940 193 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 MUCL1Q96DR8 90 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 TVP23CQ96ET8 276 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 OR4C12Q96R67 309 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 CLN8Q9UBY8 286 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
ARHGEF40-203ENST00000554514 TGIF2-C20orf24A0A0A6YYL0 155 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 HSPB1P04792 205 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 CXCL1P09341 107 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 ZNF146Q15072 292 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 Q8WTZ3 238 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 GALMQ96C23 342 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 ZDHHC11Q9H8X9 412 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 TIMM8AO60220 97 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 IFNA17P01571 189 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 OR8U8P0C7N1 319 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 RAC2P15153 192 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 TNFSF10P50591 281 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 HBG1P69891 147 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 HBG2P69892 147 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 Q6ZR03 302 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 RBKSQ9H477 322 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 SMDT1Q9H4I9 107 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 LOC102723971A0A1B0GUV8 181 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 TMEM30CPA0ZSE6 113 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 NPIPB11E5RHQ5 1161 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 HBZP02008 142 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 SLC25A6P12236 298 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 SSTR5P35346 364 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 SLC38A11Q08AI6 406 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 KIAA0141Q14154 515 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 GABRA6Q16445 453 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 HEPN1Q6WQI6 88 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 FDCSPQ8NFU4 85 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 TCTEX1D2Q8WW35 142 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 NINJ1Q92982 152 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 C5orf30Q96GV9 206 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 RCC1LQ96I51 464 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 NIT2Q9NQR4 276 aa13.19□□□□□ -0.3
ARHGEF40-203ENST00000554514 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 CEBPZOSA8MTT3 80 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 NDUFS6O75380 124 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 YIF1AO95070 293 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 S1PR2O95136 353 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 CD200P41217 278 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 ERVFRD-1P60508 538 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 FAM214BQ7L5A3 538 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 DCTN5Q9BTE1 182 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 MBNL3Q9NUK0 354 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 HEATR1Q9H583 2144 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 IGHV3-13P01766 116 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 IGHV3-7P01780 117 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 EDDM3AQ14507 147 aa13.18□□□□□ -0.3
ARHGEF40-203ENST00000554514 TRAV20A0A0B4J274 112 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 OR5H1A6NKK0 313 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 GLIPR1P48060 266 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 KHDC3LQ587J8 217 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 ZDHHC16Q969W1 377 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 WIPI2Q9Y4P8 454 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 C17orf98A8MV24 154 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 CYB5BO43169 146 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 PTBP3O95758 552 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 NDUFA6P56556 154 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 FOXF2Q12947 444 aa13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 RP1L1Q8IWN7 2480 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-203ENST00000554514 AP4M1O00189 453 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 CLN5O75503 358 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 BCL2P10415 239 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 ELOBQ15370 118 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 LRRC75BQ2VPJ9 315 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 ZNF645Q8N7E2 425 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 C9orf106Q8NAJ2 232 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms