RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ZNF660Q6AZW8 331 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-209ENST00000553949 STEAP1BQ6NZ63 245 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 DHRS11Q6UWP2 260 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 ODF3L1Q8IXM7 274 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 OR8U1Q8NH10 309 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 FAM216AQ8WUB2 273 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 GIMAP1Q8WWP7 306 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 ST6GALNAC6Q969X2 333 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 RPEQ96AT9 228 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 ABHD14BQ96IU4 210 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 ZNF48Q96MX3 618 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-209ENST00000553949 PIPOXQ9P0Z9 390 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 RNF150Q9ULK6 438 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 HILPDAQ9Y5L2 63 aa9.9□□□□□ -0.82
SHMT2-209ENST00000553949 TEP1Q99973 2627 aaKnown RBP9.9□□□□□ -0.82
SHMT2-209ENST00000553949 SAA2-SAA4A0A096LPE2 208 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 OOSP1A8MZH6 123 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 J3QRK9 145 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 HSD17B6O14756 317 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 RAB29O14966 203 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 RAB3DO95716 219 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 PPYP01298 95 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 IFNA6P05013 189 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 AKAIN1P0CW23 69 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 SAA2P0DJI9 122 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-209ENST00000553949 LUMP51884 338 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-209ENST00000553949 TSPAN5P62079 268 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 KLF9Q13886 244 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-209ENST00000553949 DIAPH2-AS1Q14236 149 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 TRIQKQ629K1 86 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF833PQ6ZTB9 187 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 LDLRAD3Q86YD5 345 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 SIGLECL1Q8N7X8 197 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 OR4D10Q8NGI6 311 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 OR6F1Q8NGZ6 308 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 TOMM40LQ969M1 308 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF2Q9BSG1 426 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-209ENST00000553949 WDR12Q9GZL7 423 aaKnown RBP9.89□□□□□ -0.83
SHMT2-209ENST00000553949 MEGF9Q9H1U4 602 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 OR2D2Q9H210 308 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 GHITMQ9H3K2 345 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 PRDM13Q9H4Q3 707 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF221Q9UK13 617 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 RBM7Q9Y580 266 aaKnown RBP9.89□□□□□ -0.83
SHMT2-209ENST00000553949 NAV3Q8IVL0 2385 aa9.89□□□□□ -0.83
SHMT2-209ENST00000553949 IGKV1D-13A0A0B4J2D9 117 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 GAPDHP04406 335 aaKnown RBP9.88□□□□□ -0.83
SHMT2-209ENST00000553949 IGKV1-13P0DP09 117 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 GPR12P47775 334 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 REG1BP48304 166 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 PPP5CP53041 499 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 AP3S2P59780 193 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 HERV-K104P61576 105 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF816Q0VGE8 651 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-209ENST00000553949 LSAMPQ13449 338 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF846Q147U1 533 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 MEF2DQ14814 521 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 PLA1AQ53H76 456 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 RPL39P5Q59GN2 51 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 CCDC144NLQ6NUI1 221 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 FAAP20Q6NZ36 180 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 RBMS3Q6XE24 437 aaKnown RBP9.88□□□□□ -0.83
SHMT2-209ENST00000553949 Q6YL49 198 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 LURAP1LQ8IV03 231 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 TOMM5Q8N4H5 51 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 ARRDC1Q8N5I2 433 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 OR4C16Q8NGL9 310 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 RTN4IP1Q8WWV3 396 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-209ENST00000553949 MOB3AQ96BX8 217 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 S1PR3Q99500 378 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF251Q9BRH9 671 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 CCDC32Q9BV29 185 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 GAB2Q9UQC2 676 aa9.88□□□□□ -0.83
SHMT2-209ENST00000553949 A0A1W2PPI3 338 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 VGLL3A8MV65 326 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 AMY2AP04746 511 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF735P0CB33 412 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 IL7P13232 177 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 CD40LGP29965 261 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 INPP1P49441 399 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 ARHGDIBP52566 201 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 FXYD4P59646 89 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF57Q68EA5 555 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-209ENST00000553949 FAM71F2Q6NXP2 309 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 TMEM17Q86X19 198 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 TGIF2LXQ8IUE1 241 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 OR8H3Q8N146 312 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF645Q8N7E2 425 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-209ENST00000553949 OR56B4Q8NH76 319 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF418Q8TF45 676 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-209ENST00000553949 C5orf30Q96GV9 206 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 SDHAF2Q9NX18 166 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 MXRA5Q9NR99 2828 aa9.87□□□□□ -0.83
SHMT2-209ENST00000553949 IGHV1-3A0A0C4DH29 117 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 OR5H14A6NHG9 310 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 DISC1C4P0D8 188 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 TIMM23O14925 209 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms