RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 ZNF580Q9UK33 172 aa13.93□□□□□ -0.18
FOXN3-204ENST00000553840 ITGB1BP1O14713 200 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 NBR2O15453 112 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 ST8SIA5O15466 376 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 IGF1P05019 195 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 SLC2A2P11168 524 aaPredicted RBP13.92□□□□□ -0.18
FOXN3-204ENST00000553840 C2orf76Q3KRA6 126 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 CMSS1Q9BQ75 279 aaKnown RBP13.92□□□□□ -0.18
FOXN3-204ENST00000553840 HSPB9Q9BQS6 159 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 IFI27L2Q9H2X8 130 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 C12orf4Q9NQ89 552 aa13.92□□□□□ -0.18
FOXN3-204ENST00000553840 RPLP1P05386 114 aaKnown RBP13.91□□□□□ -0.18
FOXN3-204ENST00000553840 MC5RP33032 325 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 CEACAM6P40199 344 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 CLDN12P56749 244 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 GABARAPL2P60520 117 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 HLA-DRB3P79483 266 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 ETV3LQ6ZN32 361 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 C18orf65Q6ZTR6 163 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 OR8U1Q8NH10 309 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 PECRQ9BY49 303 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 YTHDF1Q9BYJ9 559 aaKnown RBP13.91□□□□□ -0.18
FOXN3-204ENST00000553840 ZMAT5Q9UDW3 170 aaKnown RBP13.91□□□□□ -0.18
FOXN3-204ENST00000553840 RAB22AQ9UL26 194 aa13.91□□□□□ -0.18
FOXN3-204ENST00000553840 TRAV1-2A0A0B4J238 106 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 OR5H14A6NHG9 310 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 IGHG4P01861 327 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 MYL9P24844 172 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 CDX1P47902 265 aaPredicted RBP13.9□□□□□ -0.18
FOXN3-204ENST00000553840 HES5Q5TA89 166 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 LIN54Q6MZP7 749 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 TMEM65Q6PI78 240 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 RNF152Q8N8N0 203 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 ARHGAP5-AS1Q96IT6 56 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 P2RX4Q99571 388 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.18
FOXN3-204ENST00000553840 Q9N2K0 584 aa13.9□□□□□ -0.18
FOXN3-204ENST00000553840 FOXI3A8MTJ6 420 aaPredicted RBP13.89□□□□□ -0.19
FOXN3-204ENST00000553840 CCL24O00175 119 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 MRPS14O60783 128 aaKnown RBP13.89□□□□□ -0.19
FOXN3-204ENST00000553840 GADD45AP24522 165 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 TMEM50BP56557 158 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 RAB25P57735 213 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 NPBQ8NG41 125 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 ABHD14BQ96IU4 210 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 KCTD7Q96MP8 289 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 OR51J1Q9H342 316 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 NDUFB11Q9NX14 153 aa13.89□□□□□ -0.19
FOXN3-204ENST00000553840 TMEM272A0A1B0GTI8 110 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 TRDV1A0A1B0GX56 115 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 H7C2Y5 167 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 RBBP9O75884 186 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 GSTP1P09211 210 aaKnown RBP13.88□□□□□ -0.19
FOXN3-204ENST00000553840 CD3GP09693 182 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 CFHR3Q02985 330 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 KIR2DS1Q14954 304 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 PLGLAQ15195 96 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 SSX1Q16384 188 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 C5orf64Q2M2E5 130 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 RPL39P5Q59GN2 51 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 RAB3CQ96E17 227 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 RBMXL1Q96E39 390 aaKnown RBP13.88□□□□□ -0.19
FOXN3-204ENST00000553840 RITA1Q96K30 269 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
FOXN3-204ENST00000553840 PARP11Q9NR21 331 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
FOXN3-204ENST00000553840 TRDCB7Z8K6 153 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 LDLRAD4O15165 306 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 NDUFA3O95167 84 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 SCTP09683 121 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 CT45A6P0DMU7 189 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 CT45A5P0DMU8 189 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 CT45A7P0DMV0 189 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 RAB3BP20337 219 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 GALP22466 123 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 CNTFRP26992 372 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 PSMB8P28062 276 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 SERPINB10P48595 397 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 EGFEM1PQ0D2K5 195 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 LCNL1Q6ZST4 164 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 PTX4Q96A99 478 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 RAX2Q96IS3 184 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 DUX3Q96PT4 197 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 RNF5Q99942 180 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 AGMATQ9BSE5 352 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 OR1A1Q9P1Q5 309 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 WASHC3Q9Y3C0 194 aa13.87□□□□□ -0.19
FOXN3-204ENST00000553840 PRKDCP78527 4128 aaKnown RBP13.87□□□□□ -0.19
FOXN3-204ENST00000553840 TRAV41A0A0B4J266 112 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 METTL21EPA6NDL7 271 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 IFITM5A6NNB3 132 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 HOXD3P31249 432 aaPredicted RBP13.86□□□□□ -0.19
FOXN3-204ENST00000553840 DEFB121Q5J5C9 76 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 PLAC9Q5JTB6 97 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 CD200R1LQ6Q8B3 271 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 SPARTQ8N0X7 666 aa13.86□□□□□ -0.19
FOXN3-204ENST00000553840 OR4A4PQ8NGN8 299 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms