RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 MUC1P15941 1255 aaPredicted RBP5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 BMP5P22003 454 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 CCKARP32238 428 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 RAB5CP51148 216 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 ARHGDIBP52566 201 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 PAX9P55771 341 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 TMPRSS3P57727 454 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 TAS2R30P59541 319 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 BAXQ07812 192 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 AESQ08117 197 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 MST1LQ2TV78 715 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 KRBOX4Q5JUW0 171 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 FAM74A1Q5RGS3 127 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 IL34Q6ZMJ4 242 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 MEX3BQ6ZN04 569 aaKnown RBP5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 ZNF66Q6ZN08 573 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 FAM219AQ8IW50 185 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 ZNF561Q8N587 486 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 COMMD1Q8N668 190 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 DRAM1Q8N682 238 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 OR1L1Q8NH94 360 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 IL1F10Q8WWZ1 152 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 CORO2AQ92828 525 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 SDSLQ96GA7 329 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 YPEL2Q96QA6 119 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 OR2V2Q96R30 315 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 RAB40CQ96S21 281 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 AGMATQ9BSE5 352 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 MRPL37Q9BZE1 423 aaKnown RBP5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 FAM234AQ9H0X4 552 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 HIPK2Q9H2X6 1198 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 LINC00574Q9H8X3 128 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 GCM1Q9NP62 436 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 RAB9BQ9NP90 201 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 PARP11Q9NR21 331 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 MMP26Q9NRE1 261 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 LYRM2Q9NU23 88 aaPredicted RBP5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 LIN7CQ9NUP9 197 aaKnown RBP5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 UFSP2Q9NUQ7 469 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 TAS2R3Q9NYW6 316 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 LPAR3Q9UBY5 353 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 FBXL17Q9UF56 701 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 DUSP13Q9UII6 198 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 AKAP13Q12802 2813 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 MGAQ8IWI9 3026 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 APC2O95996 2303 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 PTPRQQ9UMZ3 2332 aa5.01□□□□□ -1.61
VIPAS39-204ENST00000553576 ASPMQ8IZT6 3477 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 TRAV39A0A0B4J263 110 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 ODAMA1E959 279 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 DPRXA6NFQ7 191 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 VSTM5A8MXK1 200 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 ATP6V1G2-DDX39BF2Z307 99 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 SPINT2O43291 252 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 CHST1O43916 411 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 IGHV1-46P01743 117 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 THBDP07204 575 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 OR8U9P0C7N5 309 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 DANCRP0C864 163 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 EGR1P18146 543 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 TNFSF4P23510 183 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 IL2RGP31785 369 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 GABRA2P47869 451 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 GLIPR1P48060 266 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 CEBPDP49716 269 aaPredicted RBP5□□□□□ -1.61
VIPAS39-204ENST00000553576 EWSR1Q01844 656 aaKnown RBP eCLIP5□□□□□ -1.61
VIPAS39-204ENST00000553576 TAGLNQ01995 201 aaKnown RBP5□□□□□ -1.61
VIPAS39-204ENST00000553576 NHLH2Q02577 135 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 PJVKQ0ZLH3 352 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 TMEM30BQ3MIR4 351 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 FBXL19-AS1Q494R0 122 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 MORN2Q502X0 79 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 CXorf66Q5JRM2 361 aaPredicted RBP5□□□□□ -1.61
VIPAS39-204ENST00000553576 C10orf91Q5T1B1 145 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 TEX36Q5VZQ5 186 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 BTNL8Q6UX41 500 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 Q6ZRM9 215 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 FOXRED2Q8IWF2 684 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 ODF3L1Q8IXM7 274 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 TMEM252Q8N6L7 170 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 OR1S2Q8NGQ3 325 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 OR13A1Q8NGR1 328 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 OR8U1Q8NH10 309 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 TMED6Q8WW62 240 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 ITLN1Q8WWA0 313 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 RND1Q92730 232 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 ARL11Q969Q4 196 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 LINC00052Q96N35 136 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 TSNAXQ99598 290 aaKnown RBP5□□□□□ -1.61
VIPAS39-204ENST00000553576 HSD17B10Q99714 261 aaKnown RBP5□□□□□ -1.61
VIPAS39-204ENST00000553576 TMPRSS5Q9H3S3 457 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 WFDC1Q9HC57 220 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 NGBQ9NPG2 151 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 OR2S2Q9NQN1 319 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 ZC4H2Q9NQZ6 224 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 ASF1BQ9NVP2 202 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 OR6C3Q9NZP0 311 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 LUZP4Q9P127 313 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 RNF7Q9UBF6 113 aa5□□□□□ -1.61
VIPAS39-204ENST00000553576 JPT1Q9UK76 154 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms