RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 OR2AK2Q8NG84 335 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 OR9G4Q8NGQ1 327 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 IL17DQ8TAD2 202 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 SELENOIQ9C0D9 397 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 SLA2Q9H6Q3 261 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 PLEKHA3Q9HB20 300 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 RANGRFQ9HD47 186 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-209ENST00000553308 KCNIP1Q9NZI2 227 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 CEPT1Q9Y6K0 416 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 TNCP24821 2201 aa6.91□□□□□ -1.3
SYNE2-209ENST00000553308 OR5H14A6NHG9 310 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 H0YJW9 148 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 H7C2Y5 167 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 CA11O75493 328 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 CSN3P07498 182 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 GSTP1P09211 210 aaKnown RBP6.9□□□□□ -1.3
SYNE2-209ENST00000553308 MGMTP16455 207 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 FUT3P21217 361 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 CD40LGP29965 261 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 HTD2P86397 168 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 LY6G6FQ5SQ64 297 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 OR2G6Q5TZ20 316 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 C1orf146Q5VVC0 180 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 DMKNQ6E0U4 476 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-209ENST00000553308 AWAT2Q6E213 333 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 LCN12Q6JVE5 192 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 RPL22L1Q6P5R6 122 aaKnown RBP6.9□□□□□ -1.3
SYNE2-209ENST00000553308 LINC00322Q6ZN03 302 aaPredicted RBP6.9□□□□□ -1.3
SYNE2-209ENST00000553308 ZNF554Q86TJ5 538 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 JAGN1Q8N5M9 183 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 GRPEL2Q8TAA5 225 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 GALMQ96C23 342 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 Q96M66 194 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 PARP12Q9H0J9 701 aaKnown RBP6.9□□□□□ -1.3
SYNE2-209ENST00000553308 ZNF355PQ9NSJ1 428 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 METTL1Q9UBP6 276 aaKnown RBP6.9□□□□□ -1.3
SYNE2-209ENST00000553308 ORC6Q9Y5N6 252 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 GMPPBQ9Y5P6 360 aa6.9□□□□□ -1.3
SYNE2-209ENST00000553308 TRBV5-5A0A0J9YX44 114 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 C13orf42A0A1B0GVH6 325 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 SHISA3A0PJX4 238 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 FAM90A7PA6NKC0 464 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 FAM90A23PA8MXZ1 464 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 PDCD6O75340 191 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 CRTAPO75718 401 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-209ENST00000553308 BRI3O95415 125 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 BAG2O95816 211 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 LALBAP00709 142 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 TRBV12-3P01733 135 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 FSTP19883 344 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 ETV1P50549 477 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 ALDH3A2P51648 485 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 CD81P60033 236 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 PSG5Q15238 335 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 HMGN3Q15651 99 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 CCDC58Q4VC31 144 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 C6orf141Q5SZD1 244 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 RNLSQ5VYX0 342 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 ZNF562Q6V9R5 426 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 Q8N402 240 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 POC5Q8NA72 575 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 OR5T1Q8NG75 326 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 IL1F10Q8WWZ1 152 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 FAM46BQ96A09 425 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 SMIM19Q96E16 107 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 ABHD14BQ96IU4 210 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 PIPOXQ9P0Z9 390 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 WASHC3Q9Y3C0 194 aa6.89□□□□□ -1.31
SYNE2-209ENST00000553308 A0A1W2PPK0 400 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 RBMY1BA6NDE4 496 aaKnown RBP6.88□□□□□ -1.31
SYNE2-209ENST00000553308 RBMY1EA6NEQ0 496 aaKnown RBP6.88□□□□□ -1.31
SYNE2-209ENST00000553308 RAB29O14966 203 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 SLC22A1O15245 554 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 OGG1O15527 345 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 GPX5O75715 221 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 RBBP9O75884 186 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 LY6G6CO95867 125 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 GLAP06280 429 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 RBMY1DP0C7P1 496 aaKnown RBP6.88□□□□□ -1.31
SYNE2-209ENST00000553308 RPS11P62280 158 aaKnown RBP eCLIP6.88□□□□□ -1.31
SYNE2-209ENST00000553308 SSBP2P81877 361 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-209ENST00000553308 DYRK1AQ13627 763 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 FXYD3Q14802 87 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 ZFP41Q8N8Y5 198 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 DRAXINQ8NBI3 349 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-209ENST00000553308 OR5AN1Q8NGI8 311 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 RHOXF1Q8NHV9 184 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 APH1BQ8WW43 257 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 PYDC1Q8WXC3 89 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 Q96MT0 163 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 OR14A2Q96R54 314 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 SULT4A1Q9BR01 284 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 MRPS18AQ9NVS2 196 aaKnown RBP6.88□□□□□ -1.31
SYNE2-209ENST00000553308 CKLFQ9UBR5 152 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 STEAP1Q9UHE8 339 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 SLC23A1Q9UHI7 598 aa6.88□□□□□ -1.31
SYNE2-209ENST00000553308 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms