RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 CT45A5P0DMU8 189 aa15.21■□□□□ 0.03
PTCH1-227ENST00000553256 CT45A7P0DMV0 189 aa15.21■□□□□ 0.03
PTCH1-227ENST00000553256 SRSF7Q16629 238 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTCH1-227ENST00000553256 OR8H1Q8NGG4 311 aa15.21■□□□□ 0.03
PTCH1-227ENST00000553256 KCTD7Q96MP8 289 aa15.21■□□□□ 0.03
PTCH1-227ENST00000553256 NOL4LQ96MY1 436 aaPredicted RBP15.21■□□□□ 0.03
PTCH1-227ENST00000553256 IGKV1D-8A0A087WSZ0 117 aa15.2■□□□□ 0.02
PTCH1-227ENST00000553256 SERPINE3A8MV23 424 aa15.2■□□□□ 0.02
PTCH1-227ENST00000553256 KCNAB3O43448 404 aa15.2■□□□□ 0.02
PTCH1-227ENST00000553256 DIRAS3O95661 229 aa15.2■□□□□ 0.02
PTCH1-227ENST00000553256 GPR12P47775 334 aa15.2■□□□□ 0.02
PTCH1-227ENST00000553256 RPL39P5Q59GN2 51 aa15.2■□□□□ 0.02
PTCH1-227ENST00000553256 SETD6Q8TBK2 473 aa15.2■□□□□ 0.02
PTCH1-227ENST00000553256 RAB29O14966 203 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 WIPF1O43516 503 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 SNRPBP14678 240 aaKnown RBP15.19■□□□□ 0.02
PTCH1-227ENST00000553256 ZBTB25P24278 435 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 CEACAM6P40199 344 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 CFHR3Q02985 330 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 CENPVQ7Z7K6 275 aaPredicted RBP15.19■□□□□ 0.02
PTCH1-227ENST00000553256 TSPAN14Q8NG11 270 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 OR5AN1Q8NGI8 311 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 OR4A4PQ8NGN8 299 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 LGALS14Q8TCE9 139 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 SLC25A38Q96DW6 304 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 ABHD14BQ96IU4 210 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 HSPB9Q9BQS6 159 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 GHITMQ9H3K2 345 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 PIPOXQ9P0Z9 390 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 DAPK2Q9UIK4 370 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 ZNF580Q9UK33 172 aa15.19■□□□□ 0.02
PTCH1-227ENST00000553256 A0A087WXM4 84 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 TRBV6-7A0A0A0MS04 114 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 FABP7O15540 132 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 TNFAIP8O95379 198 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 CD3GP09693 182 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 GSTT2P0CG29 244 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 GSTT2BP0CG30 244 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 CNTFRP26992 372 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 TGFBR1P36897 503 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 SCAND1P57086 179 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 NSUN5P1Q3KNT7 163 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 IGSF11Q5DX21 431 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 C9orf152Q5JTZ5 239 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 NPBQ8NG41 125 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 OR5H6Q8NGV6 325 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 C5orf30Q96GV9 206 aa15.18■□□□□ 0.02
PTCH1-227ENST00000553256 ZNF230Q9UIE0 474 aaPredicted RBP15.18■□□□□ 0.02
PTCH1-227ENST00000553256 METTL21EPA6NDL7 271 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 H0YJW9 148 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 NDUFA3O95167 84 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 ACTBP60709 375 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 ZNF260Q3ZCT1 412 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 ARSJQ5FYB0 599 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-227ENST00000553256 SLC35E3Q7Z769 313 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 ZNF329Q86UD4 541 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 STPG2Q8N412 459 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 WFDC9Q8NEX5 89 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 MAFIPQ8WZ33 124 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 RDH8Q9NYR8 311 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 ZNF107Q9UII5 783 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-227ENST00000553256 LINC00527Q9UJ94 153 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 GAB2Q9UQC2 676 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 PLXNB1O43157 2135 aa15.17■□□□□ 0.02
PTCH1-227ENST00000553256 LOC100506127A0A0U1RQW1 187 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 PSMB11A5LHX3 300 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 NCBP2LA6PVI3 153 aaKnown RBP15.16■□□□□ 0.02
PTCH1-227ENST00000553256 PEX14O75381 377 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 DTYMKP23919 212 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 LINC00205P59089 165 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 MXD1Q05195 221 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 CDNFQ49AH0 187 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 KPRPQ5T749 579 aaPredicted RBP15.16■□□□□ 0.02
PTCH1-227ENST00000553256 SAMD5Q5TGI4 173 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 HACD4Q5VWC8 232 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 RNF152Q8N8N0 203 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 CHPT1Q8WUD6 406 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 EDARADDQ8WWZ3 215 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 ATG5Q9H1Y0 275 aa15.16■□□□□ 0.02
PTCH1-227ENST00000553256 TSSC4Q9Y5U2 329 aaPredicted RBP15.16■□□□□ 0.02
PTCH1-227ENST00000553256 SSX5O60225 188 aa15.15■□□□□ 0.02
PTCH1-227ENST00000553256 IGF1P05019 195 aa15.15■□□□□ 0.02
PTCH1-227ENST00000553256 SMIM18P0DKX4 95 aa15.15■□□□□ 0.02
PTCH1-227ENST00000553256 SERPINB10P48595 397 aa15.15■□□□□ 0.02
PTCH1-227ENST00000553256 KIR2DS1Q14954 304 aa15.15■□□□□ 0.02
PTCH1-227ENST00000553256 ZNF383Q8NA42 475 aa15.15■□□□□ 0.02
PTCH1-227ENST00000553256 RHBDL2Q9NX52 303 aa15.15■□□□□ 0.02
PTCH1-227ENST00000553256 A0A075B6Q4 140 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 AP4M1O00189 453 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 HLA-DRB1P01911 266 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 GSTP1P09211 210 aaKnown RBP15.14■□□□□ 0.01
PTCH1-227ENST00000553256 ARL6IP1Q15041 203 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 FAM131AQ6UXB0 335 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 GLDNQ6ZMI3 551 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-227ENST00000553256 ETV3LQ6ZN32 361 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 OR4F17Q8NGA8 305 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 OR4X2Q8NGF9 303 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 R3HDM4Q96D70 268 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 OR4F4Q96R69 305 aa15.14■□□□□ 0.01
PTCH1-227ENST00000553256 RNF150Q9ULK6 438 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms