RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 TRBV6-7A0A0A0MS04 114 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 OR2F2O95006 317 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 APOA1P02647 267 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 FAM106CPP0CH98 169 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 ELK1P19419 428 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 TAS2R20P59543 309 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 BLCAPP62952 87 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 HES1Q14469 280 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 HNF4GQ14541 408 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 RPL39P5Q59GN2 51 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 MZT2AQ6P582 158 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 ZNF833PQ6ZTB9 187 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 GVQW1Q8N7I0 195 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 C3orf56Q8N813 242 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 OR10J5Q8NHC4 309 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 EDARADDQ8WWZ3 215 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 AP3S1Q92572 193 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 RBM14Q96PK6 669 aaKnown RBP11.28□□□□□ -0.6
PTCH1-226ENST00000553011 BCL7BQ9BQE9 202 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 ZNF251Q9BRH9 671 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 MRPL20Q9BYC9 149 aaKnown RBP11.28□□□□□ -0.6
PTCH1-226ENST00000553011 TOLLIPQ9H0E2 274 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 C16orf95Q9H693 158 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 RANBP3Q9H6Z4 567 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-226ENST00000553011 RNF150Q9ULK6 438 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
PTCH1-226ENST00000553011 A0A1B0GUS0 222 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 MEIS3P1A6NDR6 274 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 H3BMQ9 156 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 TXNL1O43396 289 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 NOL3O60936 208 aaKnown RBP11.27□□□□□ -0.61
PTCH1-226ENST00000553011 DIRAS3O95661 229 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 FCER2P06734 321 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 LPLP06858 475 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 TMEM11P17152 192 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 LSAMPQ13449 338 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 Q6ZS46 218 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 C16orf82Q7Z2V1 217 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 DYNC2LI1Q8TCX1 351 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-226ENST00000553011 CMTM3Q96MX0 182 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 GINS4Q9BRT9 223 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 ZNF702PQ9H963 129 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
PTCH1-226ENST00000553011 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-226ENST00000553011 RAB29O14966 203 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 CD1BP29016 333 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 PROK1P58294 105 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 EBI3Q14213 229 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 HOGA1Q86XE5 327 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 H1FOOQ8IZA3 346 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-226ENST00000553011 BEST4Q8NFU0 473 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 WFDC12Q8WWY7 111 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 ZNF747Q9BV97 191 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 PIPOXQ9P0Z9 390 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 ANXA10Q9UJ72 324 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 ANK2Q01484 3957 aa11.26□□□□□ -0.61
PTCH1-226ENST00000553011 SMIM31A0A1B0GVY4 71 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 CCDC160A6NGH7 325 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 HAX1O00165 279 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 PROP1O75360 226 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 HLA-DQB1P01920 261 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 AMY1AP04745 511 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 AMY2AP04746 511 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 OR8U9P0C7N5 309 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 SOX6P35712 828 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 KRTAP10-3P60369 221 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 SRSF4Q08170 494 aaKnown RBP11.25□□□□□ -0.61
PTCH1-226ENST00000553011 FAM71F2Q6NXP2 309 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 CNIH2Q6PI25 160 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 GLDNQ6ZMI3 551 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-226ENST00000553011 Q8N2B8 174 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 Q8N6K4 173 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 OR2T10Q8NGZ9 312 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 OR8U1Q8NH10 309 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 OR2T6Q8NHC8 308 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 S1PR3Q99500 378 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 PRSS22Q9GZN4 317 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 MIXL1Q9H2W2 232 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
PTCH1-226ENST00000553011 ZNF221Q9UK13 617 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
PTCH1-226ENST00000553011 MOB4Q9Y3A3 225 aa11.25□□□□□ -0.61
PTCH1-226ENST00000553011 CTDSP2O14595 271 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 MOSP00540 346 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 CTXN2P0C2S0 81 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 NFYAP23511 347 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-226ENST00000553011 PRSS3P35030 304 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 CBX5P45973 191 aa11.24□□□□□ -0.61
PTCH1-226ENST00000553011 GPR12P47775 334 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms