RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 FAM71E2Q8N5Q1 922 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 LINC00311Q8N616 119 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 DRAM1Q8N682 238 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 CD300LFQ8TDQ1 290 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 PHYHIPLQ96FC7 376 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 SPIN2AQ99865 258 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 SPIN2BQ9BPZ2 258 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 PLEKHF2Q9H8W4 249 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 PLEKHA2Q9HB19 425 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 LAMP3Q9UQV4 416 aa8.12□□□□□ -1.11
TMEM116-216ENST00000552800 TRBV23-1A0A0A0MS06 115 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 IGHV1-69-2A0A0G2JMI3 117 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 IGHV3-64DA0A0J9YX35 117 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 hADV38S2A0JD32 116 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 FAM90A9PA6NNJ1 464 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 B8ZZF3 427 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 FAM90A26D6RGX4 464 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 CCSO14618 274 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 TAAR5O14804 337 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 PHF1O43189 567 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 FCN3O75636 299 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 CYB5R3P00387 301 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 RBP4P02753 201 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 HOXB5P09067 269 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 OR8U9P0C7N5 309 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 GNLYP22749 145 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 RAB7AP51149 207 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 BRWD1-AS2P59051 145 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 SNRPD2P62316 118 aaKnown RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 HOXA4Q00056 320 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 IAH1Q2TAA2 248 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 SP6Q3SY56 376 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 TMEM155Q4W5P6 130 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 GPR157Q5UAW9 335 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 HEPN1Q6WQI6 88 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF841Q6ZN19 808 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 OR8U1Q8NH10 309 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 C8orf46Q8TAG6 207 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 STOML3Q8TAV4 291 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 MRGPRDQ8TDS7 321 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 NEUROG1Q92886 237 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 HSD17B10Q99714 261 aaKnown RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 PDCD10Q9BUL8 212 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 RAB1BQ9H0U4 201 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 OR2S2Q9NQN1 319 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 LIN7CQ9NUP9 197 aaKnown RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 CACFD1Q9UGQ2 172 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 KLF2Q9Y5W3 355 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 AUP1Q9Y679 476 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 NBEAQ8NFP9 2946 aa8.11□□□□□ -1.11
TMEM116-216ENST00000552800 SPTBN1Q01082 2364 aaKnown RBP8.11□□□□□ -1.11
TMEM116-216ENST00000552800 DOCK11Q5JSL3 2073 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 IGHV3OR15-7A0A075B7D8 119 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 TRGV10A0A0A0MS01 117 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 TRAV39A0A0B4J263 110 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 HSPA12AO43301 675 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 IFNA7P01567 189 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 IGKV1-39P01597 117 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 IGHV2-70P01814 119 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 RLN2P04090 185 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 IGKV1D-39P04432 117 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 CD80P33681 288 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 SSTR5P35346 364 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 P2RY1P47900 373 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF137PP52743 207 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 TMEM33P57088 247 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 RAB32Q13637 225 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 HFEQ30201 348 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 PDLIM3Q53GG5 364 aaPredicted RBP8.1□□□□□ -1.11
TMEM116-216ENST00000552800 CLLU1Q5K131 121 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 FAM201AQ5SY85 155 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 TGIF2LYQ8IUE0 185 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 ZNF695Q8IW36 515 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 ZCCHC24Q8N2G6 241 aaKnown RBP8.1□□□□□ -1.11
TMEM116-216ENST00000552800 SLC35G3Q8N808 338 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 INO80EQ8NBZ0 244 aaPredicted RBP8.1□□□□□ -1.11
TMEM116-216ENST00000552800 OR52L2PQ8NGH6 319 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 IL1F10Q8WWZ1 152 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 NINJ1Q92982 152 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 CCL13Q99616 98 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 CALYQ9NYX4 217 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 RPUSD1Q9UJJ7 312 aaKnown RBP8.1□□□□□ -1.11
TMEM116-216ENST00000552800 POMT1Q9Y6A1 747 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 PKDREJQ9NTG1 2253 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 KALRNO60229 2985 aa8.1□□□□□ -1.11
TMEM116-216ENST00000552800 LINC00862A6NCI5 91 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 NKX6-3A6NJ46 265 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 A6NNC1 897 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 C17orf98A8MV24 154 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 E5RGE8 158 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 OVOL3O00110 214 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 HSD17B6O14756 317 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 ARPC5O15511 151 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 ST8SIA3O43173 380 aa8.09□□□□□ -1.11
TMEM116-216ENST00000552800 EIF4EBP3O60516 100 aaPredicted RBP8.09□□□□□ -1.11
TMEM116-216ENST00000552800 ATG12O94817 140 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms