RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 RDH8Q9NYR8 311 aa13.08□□□□□ -0.32
GCN1-209ENST00000551920 PITPNC1Q9UKF7 332 aa13.08□□□□□ -0.32
GCN1-209ENST00000551920 SIGLEC9Q9Y336 463 aa13.08□□□□□ -0.32
GCN1-209ENST00000551920 ITGB1BP1O14713 200 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 DIRAS3O95661 229 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 IGKV1D-33P01593 117 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 IGKV1-33P01594 117 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 AMY1AP04745 511 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 AMY2AP04746 511 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 RPL39P5Q59GN2 51 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 C12orf54Q6X4T0 127 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 Q6ZS46 218 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 MOB3BQ86TA1 216 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 SNAPC3Q92966 411 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 SLC25A33Q9BSK2 321 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 NPFFR1Q9GZQ6 430 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 C16orf95Q9H693 158 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 ZNF702PQ9H963 129 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 MMP24Q9Y5R2 645 aa13.07□□□□□ -0.32
GCN1-209ENST00000551920 MEIS3P1A6NDR6 274 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 TXNL1O43396 289 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 PROP1O75360 226 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 OR2F2O95006 317 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 HLA-DQB1P01920 261 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 FCER2P06734 321 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 LSAMPQ13449 338 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 THNSL2Q86YJ6 484 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 Q8N6K4 173 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 OR4C13Q8NGP0 309 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 WFDC12Q8WWY7 111 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 EDARADDQ8WWZ3 215 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 AP3S1Q92572 193 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 CMTM3Q96MX0 182 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 RBM14Q96PK6 669 aaKnown RBP13.06□□□□□ -0.32
GCN1-209ENST00000551920 MIXL1Q9H2W2 232 aa13.06□□□□□ -0.32
GCN1-209ENST00000551920 RANBP3Q9H6Z4 567 aaPredicted RBP13.06□□□□□ -0.32
GCN1-209ENST00000551920 CCDC59Q9P031 241 aaKnown RBP13.06□□□□□ -0.32
GCN1-209ENST00000551920 CLPSL1A2RUU4 121 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 FAM106CPP0CH98 169 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 PROK1P58294 105 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 BLCAPP62952 87 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 EBI3Q14213 229 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 HNF4GQ14541 408 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 H1FOOQ8IZA3 346 aaPredicted RBP13.05□□□□□ -0.32
GCN1-209ENST00000551920 Q8N2B8 174 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 OR10J5Q8NHC4 309 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 NABP2Q9BQ15 211 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 BEX1Q9HBH7 125 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 ANXA10Q9UJ72 324 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 RNF150Q9ULK6 438 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 ANAPC10Q9UM13 185 aa13.05□□□□□ -0.32
GCN1-209ENST00000551920 SH2D7A6NKC9 451 aaPredicted RBP13.04□□□□□ -0.32
GCN1-209ENST00000551920 RAB29O14966 203 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 NOL3O60936 208 aaKnown RBP13.04□□□□□ -0.32
GCN1-209ENST00000551920 TMEM11P17152 192 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 SRSF4Q08170 494 aaKnown RBP13.04□□□□□ -0.32
GCN1-209ENST00000551920 HES1Q14469 280 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 FAM71F2Q6NXP2 309 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 MZT2AQ6P582 158 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 C16orf82Q7Z2V1 217 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 BEST4Q8NFU0 473 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 EAF1Q96JC9 268 aaPredicted RBP13.04□□□□□ -0.32
GCN1-209ENST00000551920 SLIRPQ9GZT3 109 aaKnown RBP13.04□□□□□ -0.32
GCN1-209ENST00000551920 PIPOXQ9P0Z9 390 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 RNF114Q9Y508 228 aa13.04□□□□□ -0.32
GCN1-209ENST00000551920 CTDSP2O14595 271 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 OR8U9P0C7N5 309 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 CD1BP29016 333 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 SOX6P35712 828 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 LINC00205P59089 165 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 CNIH2Q6PI25 160 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 C3orf56Q8N813 242 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 OR8U1Q8NH10 309 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 GINS4Q9BRT9 223 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 MOB4Q9Y3A3 225 aa13.03□□□□□ -0.32
GCN1-209ENST00000551920 A0A1B0GUS0 222 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 FAM25AB3EWG3 89 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 FAM25CB3EWG5 89 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 FAM25GB3EWG6 89 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 LPLP06858 475 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 CT45A6P0DMU7 189 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 CT45A5P0DMU8 189 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 CT45A7P0DMV0 189 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 NFYAP23511 347 aaPredicted RBP13.02□□□□□ -0.33
GCN1-209ENST00000551920 GLDNQ6ZMI3 551 aaPredicted RBP13.02□□□□□ -0.33
GCN1-209ENST00000551920 SNX29P2Q8IUI4 249 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 C5orf56Q8N8D9 126 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 DRAXINQ8NBI3 349 aaPredicted RBP13.02□□□□□ -0.33
GCN1-209ENST00000551920 ZNF747Q9BV97 191 aa13.02□□□□□ -0.33
GCN1-209ENST00000551920 MRPS7Q9Y2R9 242 aaKnown RBP13.02□□□□□ -0.33
GCN1-209ENST00000551920 IGKV1D-13A0A0B4J2D9 117 aa13.01□□□□□ -0.33
GCN1-209ENST00000551920 TUSC2O75896 110 aa13.01□□□□□ -0.33
GCN1-209ENST00000551920 MOSP00540 346 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms