RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 FAM89BQ8N5H3 189 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 TCTEX1D1Q8N7M0 179 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 HSPB9Q9BQS6 159 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 CENPOQ9BU64 300 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 MRPL20Q9BYC9 149 aaKnown RBP8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 RNF150Q9ULK6 438 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 TRAV41A0A0B4J266 112 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 WI2-2373I1.2A0A1W2PRP0 233 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 HSPA12AO43301 675 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 SLC2A2P11168 524 aaPredicted RBP8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 CPEP16870 476 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 CD40LGP29965 261 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 PPIFP30405 207 aaKnown RBP8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 HSPA13P48723 471 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 MRPS15P82914 257 aaKnown RBP8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 RUNX1Q01196 453 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 CD69Q07108 199 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 GNMTQ14749 295 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 RAB11BQ15907 218 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR56B1Q8NGI3 324 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 SETD6Q8TBK2 473 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 TMEM203Q969S6 136 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 PTX4Q96A99 478 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 B9D2Q9BPU9 175 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 ANKRD60Q9BZ19 345 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 LPAR5Q9H1C0 372 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 IFI27L2Q9H2X8 130 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 C12orf4Q9NQ89 552 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 BLOC1S6Q9UL45 172 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 VSIG4Q9Y279 399 aa8.51□□□□□ -1.05
VTI1BP3-201ENST00000550220 IGHV7-81A0A0B4J1V7 117 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 PDCD5O14737 125 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 NDUFA3O95167 84 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 IGLV1-40P01703 118 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 GSTP1P09211 210 aaKnown RBP8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR8U8P0C7N1 319 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 NHLRC4P0CG21 123 aaPredicted RBP8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 CT45A6P0DMU7 189 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 CT45A5P0DMU8 189 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 CT45A7P0DMV0 189 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 CEACAM6P40199 344 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR3A3P47888 321 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 SERPINB10P48595 397 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 RAB9AP51151 201 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 AQP4P55087 323 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 FHL3Q13643 280 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 PYHIN1Q6K0P9 492 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF491Q8N8L2 437 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 MINDY2Q8NBR6 621 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR11H1Q8NG94 326 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR5AN1Q8NGI8 311 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR1N2Q8NGR9 330 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 MYOZ3Q8TDC0 251 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 MGLLQ99685 303 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 AGMATQ9BSE5 352 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 NICN1Q9BSH3 213 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 CCDC90BQ9GZT6 254 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 PARP11Q9NR21 331 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 AK3Q9UIJ7 227 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF221Q9UK13 617 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 WASHC3Q9Y3C0 194 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 AK6Q9Y3D8 172 aaKnown RBP8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 V9GY05 133 aa8.5□□□□□ -1.05
VTI1BP3-201ENST00000550220 SEC14L6B5MCN3 397 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 H7C2Y5 167 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 RRHO14718 337 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 ARPC1BO15143 372 aaKnown RBP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 ATP6V0E1O15342 81 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 ST8SIA5O15466 376 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 SOCS1O15524 211 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 CRHBPP24387 322 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 CALRP27797 417 aaKnown RBP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 CRIP2P52943 208 aaPredicted RBP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 HLA-DRB3P79483 266 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 PLGLAQ15195 96 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 P2RY14Q15391 338 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 TMEM91Q6ZNR0 172 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 FAM3DQ96BQ1 224 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 RITA1Q96K30 269 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 DUX3Q96PT4 197 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 TSNAXQ99598 290 aaKnown RBP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 CMSS1Q9BQ75 279 aaKnown RBP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 C11orf54Q9H0W9 315 aaPredicted RBP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 Q9N2K0 584 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 NKX1-2Q9UD57 310 aaPredicted RBP8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 RAB22AQ9UL26 194 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 WSB1Q9Y6I7 421 aa8.49□□□□□ -1.05
VTI1BP3-201ENST00000550220 A0A0A6YYD4 124 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 TRAV1-2A0A0B4J238 106 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 TRDCB7Z8K6 153 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 G3V318 75 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 H0YJW9 148 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 DENRO43583 198 aaKnown RBP8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 SPDEFO95238 335 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 DIRAS3O95661 229 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 VEGFCP49767 419 aa8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 RPS25P62851 125 aaKnown RBP8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 TAGLNQ01995 201 aaKnown RBP8.48□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF616Q08AN1 781 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms