RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 TRAV1-2A0A0B4J238 106 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 LDLRAD4O15165 306 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 RPLP1P05386 114 aaKnown RBP14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 VDAC1P21796 283 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 ZBTB25P24278 435 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 CDX1P47902 265 aaPredicted RBP14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 VEGFCP49767 419 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 CLDN12P56749 244 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 SSX1Q16384 188 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 CD200R1LQ6Q8B3 271 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 EDARADDQ8WWZ3 215 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 RBMXL1Q96E39 390 aaKnown RBP14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 AGMATQ9BSE5 352 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 MCRIP2Q9BUT9 160 aaKnown RBP14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 Q9N2K0 584 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 C12orf4Q9NQ89 552 aa14.63□□□□□ -0.07
CHMP1A-207ENST00000549328 ERICH4A6NGS2 130 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 PDCD5O14737 125 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 NBR2O15453 112 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 ST8SIA5O15466 376 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 DENRO43583 198 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 MRPS14O60783 128 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 HLA-DRB1P01911 266 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 SLC2A2P11168 524 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 HLA-DRB3P79483 266 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 NPBQ8NG41 125 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 ARHGAP5-AS1Q96IT6 56 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 RITA1Q96K30 269 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 CMSS1Q9BQ75 279 aaKnown RBP14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 HDHD3Q9BSH5 251 aaPredicted RBP14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 PECRQ9BY49 303 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 NDUFB11Q9NX14 153 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 RAB22AQ9UL26 194 aa14.62□□□□□ -0.07
CHMP1A-207ENST00000549328 GALP22466 123 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 MC5RP33032 325 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 CEACAM6P40199 344 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 EGFEM1PQ0D2K5 195 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 KIR2DS1Q14954 304 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 C5orf64Q2M2E5 130 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 PTX4Q96A99 478 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 KCTD7Q96MP8 289 aa14.61□□□□□ -0.07
CHMP1A-207ENST00000549328 TMEM272A0A1B0GTI8 110 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 TRDV1A0A1B0GX56 115 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 OR5H14A6NHG9 310 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 CCL24O00175 119 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 HSPA12AO43301 675 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 NDUFA3O95167 84 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 SCTP09683 121 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 CT45A6P0DMU7 189 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 CT45A5P0DMU8 189 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 CT45A7P0DMV0 189 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 PSMB8P28062 276 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 GABARAPL2P60520 117 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 PLAC9Q5JTB6 97 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 LIN54Q6MZP7 749 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 DPF1Q92782 380 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 RAX2Q96IS3 184 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 PARP12Q9H0J9 701 aaKnown RBP14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 C11orf54Q9H0W9 315 aaPredicted RBP14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 OR51J1Q9H342 316 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 KIAA1456Q9P272 454 aa14.6□□□□□ -0.07
CHMP1A-207ENST00000549328 IFITM5A6NNB3 132 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 CNTFRP26992 372 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 PPIFP30405 207 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 RPL39P5Q59GN2 51 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 HES5Q5TA89 166 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 FAM131AQ6UXB0 335 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 LCNL1Q6ZST4 164 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 OR5AN1Q8NGI8 311 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 OR8U1Q8NH10 309 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 ABHD14BQ96IU4 210 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 RNF5Q99942 180 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 OR1A1Q9P1Q5 309 aa14.59□□□□□ -0.07
CHMP1A-207ENST00000549328 IGHV7-81A0A0B4J1V7 117 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 TRDCB7Z8K6 153 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 RBBP9O75884 186 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 ATP6V1G2O95670 118 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 MYL9P24844 172 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 KRTAP10-11P60412 298 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 MYOZ3Q8TDC0 251 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 RAB3CQ96E17 227 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 ZMAT5Q9UDW3 170 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 KCNK7Q9Y2U2 307 aa14.58□□□□□ -0.08
CHMP1A-207ENST00000549328 SHISA3A0PJX4 238 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 H0YJW9 148 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 K7EIL1 84 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 ATP6V0E1O15342 81 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 CD3GP09693 182 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 RAB3BP20337 219 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 RAB6AP20340 208 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 SERPINB10P48595 397 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 OR10A3P58181 314 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 MRPS15P82914 257 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 PLA2G7Q13093 441 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 UBE2UQ5VVX9 321 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 ZNF660Q6AZW8 331 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 OR4A4PQ8NGN8 299 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 C4orf3Q8WVX3 66 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 DUX3Q96PT4 197 aa14.57□□□□□ -0.08
CHMP1A-207ENST00000549328 YTHDF1Q9BYJ9 559 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms