RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 RBKSQ9H477 322 aa12.07□□□□□ -0.48
CACNB3-209ENST00000548860 TRBV6-7A0A0A0MS04 114 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 TRAV38-1A0A0B4J264 116 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 ZG16O60844 167 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 TOX4O94842 621 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 HAND1O96004 215 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 OR5A2Q8NGI9 324 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 RAMP3O60896 148 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-209ENST00000548860 HIST3H3Q16695 136 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 Q6ZRM9 215 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 PLPPR1Q8TBJ4 325 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 LYRM2Q9NU23 88 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-209ENST00000548860 FBLN5Q9UBX5 448 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 YLPM1P49750 1951 aaKnown RBP12.06□□□□□ -0.48
CACNB3-209ENST00000548860 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.48
CACNB3-209ENST00000548860 SPINT2O43291 252 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 THBS3P49746 956 aa12.06□□□□□ -0.48
CACNB3-209ENST00000548860 S100A8P05109 93 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 SP1P08047 785 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
CACNB3-209ENST00000548860 UBALD2Q8IYN6 164 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 TMEM178AQ8NBL3 297 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 SPOCK3Q9BQ16 436 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 OR51I2Q9H344 312 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 ZDHHC8Q9ULC8 765 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 TNCP24821 2201 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 PGPEP1LA6NFU8 196 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 PRR31Q5SQ13 230 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 C10orf35Q96D05 121 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 MEGF10Q96KG7 1140 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 TCEAL7Q9BRU2 100 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 CXorf65A6NEN9 183 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 C9orf172C9J069 976 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 CLDN34H7C241 214 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 S1PR2O95136 353 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 CXCL1P09341 107 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 OR8U8P0C7N1 319 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 FBXW9Q5XUX1 488 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 SPNS3Q6ZMD2 512 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 COMMD1Q8N668 190 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 Q8WTZ3 238 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 FAM103A1Q9BTL3 118 aaKnown RBP12.05□□□□□ -0.48
CACNB3-209ENST00000548860 TMEM9BQ9NQ34 198 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 TUBD1Q9UJT1 453 aa12.05□□□□□ -0.48
CACNB3-209ENST00000548860 ENSAO43768 121 aaKnown RBP12.04□□□□□ -0.48
CACNB3-209ENST00000548860 NDUFS6O75380 124 aaKnown RBP12.04□□□□□ -0.48
CACNB3-209ENST00000548860 TAS2R30P59541 319 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 IL24Q13007 206 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 TRA2AQ13595 282 aaKnown RBP eCLIP12.04□□□□□ -0.48
CACNB3-209ENST00000548860 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 FAM78BQ5VT40 261 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 LYG1Q8N1E2 194 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 DRAM1Q8N682 238 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 CA5BP1Q8WTZ4 195 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 GALNT14Q96FL9 552 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 RAB40CQ96S21 281 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 CD5P06127 495 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 SNIP1Q8TAD8 396 aaKnown RBP12.04□□□□□ -0.48
CACNB3-209ENST00000548860 RND1Q92730 232 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 REPIN1Q9BWE0 567 aaKnown RBP12.04□□□□□ -0.48
CACNB3-209ENST00000548860 FUT9Q9Y231 359 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 TRAV24A0A0B4J272 114 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 YKT6O15498 198 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 NEURL1O76050 574 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 MDH2P40926 338 aaKnown RBP12.04□□□□□ -0.48
CACNB3-209ENST00000548860 TCL1AP56279 114 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
CACNB3-209ENST00000548860 J3QT63 122 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 HBZP02008 142 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 REG1BP48304 166 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 SELENOVP59797 346 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 GCSAMLQ5JQS6 135 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 ZNF703Q9H7S9 590 aaPredicted RBP12.03□□□□□ -0.48
CACNB3-209ENST00000548860 BOD1L1Q8NFC6 3051 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 IGLV3-32A0A0A0MS00 114 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 TMEM30CPA0ZSE6 113 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 PITX3O75364 302 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 OR5D13Q8NGL4 314 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 DTD1Q8TEA8 209 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 GSN-AS1Q9NRJ2 163 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 ADAMTS9Q9P2N4 1935 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 ZNRF1Q8ND25 227 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 OR51G1Q8NGK1 321 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 GINS3Q9BRX5 216 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 PCGF1Q9BSM1 259 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 TECTAO75443 2155 aa12.03□□□□□ -0.48
CACNB3-209ENST00000548860 MPV17P39210 176 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 WNT5AP41221 380 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 GALR1P47211 349 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 B3GALT5-AS1P59052 145 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 CTAG1AP78358 180 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 CYB5R2Q6BCY4 276 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 ZNF251Q9BRH9 671 aa12.02□□□□□ -0.48
CACNB3-209ENST00000548860 NUDT16L1Q9BRJ7 211 aaKnown RBP12.02□□□□□ -0.48
CACNB3-209ENST00000548860 OPN3Q9H1Y3 402 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms