RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 LSM3P62310 102 aaKnown RBP12.5□□□□□ -0.41
DDX54-205ENST00000548786 ARFRP1Q13795 201 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 EBI3Q14213 229 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 TCTEX1D4Q5JR98 221 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 IDNKQ5T6J7 187 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 GLDNQ6ZMI3 551 aaPredicted RBP12.5□□□□□ -0.41
DDX54-205ENST00000548786 ZNF833PQ6ZTB9 187 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 SLC35E3Q7Z769 313 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 C1QL4Q86Z23 238 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 VCX3AQ9NNX9 186 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 TCRBV4S1A1TA0A5B7 111 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 FGF16O43320 207 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 CNTFRP26992 372 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 IGSF11Q5DX21 431 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 NDUFA11Q86Y39 141 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 Q8N9W7 124 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 R3HDM4Q96D70 268 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 RITA1Q96K30 269 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 S1PR3Q99500 378 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 NABP2Q9BQ15 211 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 C11orf54Q9H0W9 315 aaPredicted RBP12.49□□□□□ -0.41
DDX54-205ENST00000548786 PLSCR3Q9NRY6 295 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 MGAT4AQ9UM21 535 aa12.49□□□□□ -0.41
DDX54-205ENST00000548786 PSMB11A5LHX3 300 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 FABP7O15540 132 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 GSTT2P0CG29 244 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 GSTT2BP0CG30 244 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 TALDO1P37837 337 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 MMDQ15546 238 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 CDNFQ49AH0 187 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 FAM131AQ6UXB0 335 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 DRAXINQ8NBI3 349 aaPredicted RBP12.48□□□□□ -0.41
DDX54-205ENST00000548786 OR4X2Q8NGF9 303 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 OR5H6Q8NGV6 325 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 PTX4Q96A99 478 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 RASL11BQ9BPW5 248 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 RDH8Q9NYR8 311 aa12.48□□□□□ -0.41
DDX54-205ENST00000548786 TMEM235A6NFC5 223 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 RAB29O14966 203 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 AIREO43918 545 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 GPR12P47775 334 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 ACTBP60709 375 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 LY6G6FQ5SQ64 297 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 NUDCD2Q8WVJ2 157 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 EDARADDQ8WWZ3 215 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 HSPB9Q9BQS6 159 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 RHBDL2Q9NX52 303 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 PIPOXQ9P0Z9 390 aa12.47□□□□□ -0.41
DDX54-205ENST00000548786 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 IGHG2P01859 326 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 CT45A6P0DMU7 189 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 CT45A5P0DMU8 189 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 CT45A7P0DMV0 189 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 LINC00205P59089 165 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 CD83Q01151 205 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 DEFA6Q01524 100 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 FOXRED2Q8IWF2 684 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 OR4A4PQ8NGN8 299 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 YIPF6Q96EC8 236 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 AGMATQ9BSE5 352 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 ST6GALNAC5Q9BVH7 336 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 ABCG5Q9H222 651 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 LIN7CQ9NUP9 197 aaKnown RBP12.46□□□□□ -0.41
DDX54-205ENST00000548786 ZNF221Q9UK13 617 aa12.46□□□□□ -0.41
DDX54-205ENST00000548786 H7C2Y5 167 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 J3QRK9 145 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 PF4V1P10720 104 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 KIR2DS1Q14954 304 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 TIMM50Q3ZCQ8 353 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 STPG2Q8N412 459 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 FAM71E2Q8N5Q1 922 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 OR10J5Q8NHC4 309 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 SLC25A38Q96DW6 304 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 GINS4Q9BRT9 223 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 OR2D2Q9H210 308 aa12.45□□□□□ -0.42
DDX54-205ENST00000548786 TSSC4Q9Y5U2 329 aaPredicted RBP12.45□□□□□ -0.42
DDX54-205ENST00000548786 KCNAB3O43448 404 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OPN1MWP04001 364 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OR8U9P0C7N5 309 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OPN1MW2P0DN77 364 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OPN1MW3P0DN78 364 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 SOX6P35712 828 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 GNG2P59768 71 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 HACD4Q5VWC8 232 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 LCNL1Q6ZST4 164 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OR4F17Q8NGA8 305 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OR8H1Q8NGG4 311 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OR8U1Q8NH10 309 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 CHPT1Q8WUD6 406 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 PHF21AQ96BD5 680 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 OR4F4Q96R69 305 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 CABLES2Q9BTV7 478 aa12.44□□□□□ -0.42
DDX54-205ENST00000548786 ZNF107Q9UII5 783 aaPredicted RBP12.44□□□□□ -0.42
DDX54-205ENST00000548786 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 G3V4G9 280 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 H0YJW9 148 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 M0R1X1 148 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 AP4M1O00189 453 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms