RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 HMGN3Q15651 99 aa17.87■□□□□ 0.45
SMARCD1-204ENST00000547637 RNF5Q99942 180 aa17.87■□□□□ 0.45
SMARCD1-204ENST00000547637 ELOVL1Q9BW60 279 aa17.87■□□□□ 0.45
SMARCD1-204ENST00000547637 CNOT2Q9NZN8 540 aaKnown RBP17.87■□□□□ 0.45
SMARCD1-204ENST00000547637 H7C2Y5 167 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 RRHO14718 337 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 HSPB1P04792 205 aaKnown RBP17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 WNT4P56705 351 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 CX3CL1P78423 397 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 CASC10Q5T4H9 136 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 ACSM6Q6P461 480 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 FAM131AQ6UXB0 335 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 DHRSXQ8N5I4 330 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 ZNF485Q8NCK3 441 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 FBXL15Q9H469 300 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 SLC23A1Q9UHI7 598 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 A3GALT2U3KPV4 340 aa17.86■□□□□ 0.45
SMARCD1-204ENST00000547637 LYL1P12980 280 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 SLURP1P55000 103 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 LRRC36Q1X8D7 754 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 ACTBL2Q562R1 376 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 OVCH2Q7RTZ1 564 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 LYPD6Q86Y78 171 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 KCNG3Q8TAE7 436 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 FAAP24Q9BTP7 215 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 TMEM59Q9BXS4 323 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 ALX4Q9H161 411 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 RIMS4Q9H426 269 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 SLA2Q9H6Q3 261 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 WASHC3Q9Y3C0 194 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 NUBP2Q9Y5Y2 271 aa17.85■□□□□ 0.45
SMARCD1-204ENST00000547637 ST8SIA5O15466 376 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 FRMD6-AS1P0C7T7 363 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 AKIRIN2Q53H80 203 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 C6orf141Q5SZD1 244 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 CD200R1LQ6Q8B3 271 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 UNQ5815/PRO19632Q6UWF5 114 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 MOB1BQ7L9L4 216 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 PPP1R27Q86WC6 154 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 MS4A15Q8N5U1 240 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 SETD6Q8TBK2 473 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 EDARADDQ8WWZ3 215 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 SULT4A1Q9BR01 284 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 IFI27L2Q9H2X8 130 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 PLEKHJ1Q9NW61 149 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 MGAT4AQ9UM21 535 aa17.84■□□□□ 0.45
SMARCD1-204ENST00000547637 ARPC1AQ92747 370 aa17.83■□□□□ 0.44
SMARCD1-204ENST00000547637 IGHV4OR15-8A0A075B7B6 117 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 A0A087WW49 117 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 ITGB1BP1O14713 200 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 HSPA12AO43301 675 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 TFAP2AP05549 437 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 CT45A6P0DMU7 189 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 CT45A5P0DMU8 189 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 CT45A7P0DMV0 189 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 ZBTB25P24278 435 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 RPS27AP62979 156 aaKnown RBP17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 ZNF562Q6V9R5 426 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 C6orf201Q7Z4U5 140 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 C5orf24Q7Z6I8 188 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 C8orf59Q8N0T1 100 aaPredicted RBP17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 PACRGLQ8N7B6 248 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 RYR3Q15413 4870 aa17.82■□□□□ 0.44
SMARCD1-204ENST00000547637 SLC22A1O15245 554 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 TPPP2P59282 170 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 ACSM3Q53FZ2 586 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 RPL39P5Q59GN2 51 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 C19orf54Q5BKX5 351 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 RBM48Q5RL73 367 aaKnown RBP17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 TSNAXQ99598 290 aaKnown RBP17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 METTL1Q9UBP6 276 aaKnown RBP17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 STUB1Q9UNE7 303 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 FBXO7Q9Y3I1 522 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 STAB2Q8WWQ8 2551 aa17.81■□□□□ 0.44
SMARCD1-204ENST00000547637 H0YJW9 148 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 SOX15O60248 233 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 BPNT1O95861 308 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 IGHV3-11P01762 117 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 CPEP16870 476 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 NDPQ00604 133 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 SRSF7Q16629 238 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 GLDNQ6ZMI3 551 aaPredicted RBP17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 AHSA2Q719I0 299 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 ANKRD13BQ86YJ7 626 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 SVOPQ8N4V2 548 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 NANOGP1Q8N7R0 232 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 OR5AN1Q8NGI8 311 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 CASTOR1Q8WTX7 329 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 PHYHIPQ92561 330 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 MS4A10Q96PG2 267 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 CLCC1Q96S66 551 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 URM1Q9BTM9 101 aaKnown RBP17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 TPSG1Q9NRR2 321 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 ZNF355PQ9NSJ1 428 aa17.8■□□□□ 0.44
SMARCD1-204ENST00000547637 EBAG9O00559 213 aa17.79■□□□□ 0.44
SMARCD1-204ENST00000547637 NAPSAO96009 420 aa17.79■□□□□ 0.44
SMARCD1-204ENST00000547637 TRGV3P03979 118 aa17.79■□□□□ 0.44
SMARCD1-204ENST00000547637 ZP3P21754 424 aa17.79■□□□□ 0.44
SMARCD1-204ENST00000547637 HTR2CP28335 458 aa17.79■□□□□ 0.44
SMARCD1-204ENST00000547637 CEACAM6P40199 344 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms