RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 PSMB6P28072 239 aa7□□□□□ -1.29
VPS29-203ENST00000546588 HRH1P35367 487 aa7□□□□□ -1.29
VPS29-203ENST00000546588 KIR2DS4P43632 304 aa7□□□□□ -1.29
VPS29-203ENST00000546588 OR3A1P47881 315 aa7□□□□□ -1.29
VPS29-203ENST00000546588 SNU13P55769 128 aaKnown RBP7□□□□□ -1.29
VPS29-203ENST00000546588 UBE2MP61081 183 aaKnown RBP7□□□□□ -1.29
VPS29-203ENST00000546588 SEC61A1P61619 476 aaKnown RBP7□□□□□ -1.29
VPS29-203ENST00000546588 SNRPD2P62316 118 aaKnown RBP7□□□□□ -1.29
VPS29-203ENST00000546588 NHLH2Q02577 135 aa7□□□□□ -1.29
VPS29-203ENST00000546588 TLE4Q04727 773 aa7□□□□□ -1.29
VPS29-203ENST00000546588 ARFRP1Q13795 201 aa7□□□□□ -1.29
VPS29-203ENST00000546588 KIR2DS1Q14954 304 aa7□□□□□ -1.29
VPS29-203ENST00000546588 HMGN3Q15651 99 aa7□□□□□ -1.29
VPS29-203ENST00000546588 RNASE10Q5GAN6 216 aaKnown RBP7□□□□□ -1.29
VPS29-203ENST00000546588 C9orf152Q5JTZ5 239 aa7□□□□□ -1.29
VPS29-203ENST00000546588 AADACL3Q5VUY0 350 aa7□□□□□ -1.29
VPS29-203ENST00000546588 OR52W1Q6IF63 320 aa7□□□□□ -1.29
VPS29-203ENST00000546588 FAHD2BQ6P2I3 314 aaPredicted RBP7□□□□□ -1.29
VPS29-203ENST00000546588 CLEC9AQ6UXN8 241 aa7□□□□□ -1.29
VPS29-203ENST00000546588 ZNF788Q6ZQV5 615 aa7□□□□□ -1.29
VPS29-203ENST00000546588 C1orf87Q8N0U7 546 aa7□□□□□ -1.29
VPS29-203ENST00000546588 ZNF561Q8N587 486 aa7□□□□□ -1.29
VPS29-203ENST00000546588 OR4S1Q8NGB4 309 aa7□□□□□ -1.29
VPS29-203ENST00000546588 OR51S1Q8NGJ8 323 aa7□□□□□ -1.29
VPS29-203ENST00000546588 OR11L1Q8NGX0 322 aa7□□□□□ -1.29
VPS29-203ENST00000546588 OR4K15Q8NH41 348 aa7□□□□□ -1.29
VPS29-203ENST00000546588 C22orf15Q8WYQ4 148 aa7□□□□□ -1.29
VPS29-203ENST00000546588 DYRK2Q92630 601 aa7□□□□□ -1.29
VPS29-203ENST00000546588 CORO2AQ92828 525 aa7□□□□□ -1.29
VPS29-203ENST00000546588 FAHD2AQ96GK7 314 aa7□□□□□ -1.29
VPS29-203ENST00000546588 SLC6A7Q99884 636 aa7□□□□□ -1.29
VPS29-203ENST00000546588 PIMREGQ9BSJ6 248 aa7□□□□□ -1.29
VPS29-203ENST00000546588 CACNG6Q9BXT2 260 aa7□□□□□ -1.29
VPS29-203ENST00000546588 PPA2Q9H2U2 334 aa7□□□□□ -1.29
VPS29-203ENST00000546588 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
VPS29-203ENST00000546588 CHODLQ9H9P2 273 aa7□□□□□ -1.29
VPS29-203ENST00000546588 ZNF286AQ9HBT8 521 aa7□□□□□ -1.29
VPS29-203ENST00000546588 ZFP57Q9NU63 452 aa7□□□□□ -1.29
VPS29-203ENST00000546588 DNAJB11Q9UBS4 358 aa7□□□□□ -1.29
VPS29-203ENST00000546588 SCP2D1Q9UJQ7 156 aa7□□□□□ -1.29
VPS29-203ENST00000546588 ZNF221Q9UK13 617 aa7□□□□□ -1.29
VPS29-203ENST00000546588 PPP1R3CQ9UQK1 317 aa7□□□□□ -1.29
VPS29-203ENST00000546588 DOCK11Q5JSL3 2073 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 A0A1W2PPQ1 181 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 MEIS3P1A6NDR6 274 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 OOEPA6NGQ2 149 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 RFPL4AA6NLU0 287 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 DISC1C4P0D8 188 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 RFPL4AL1F8VTS6 287 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 TMEM178BH3BS89 294 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 K7N7A8 449 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 M0QZK8 103 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 OVOL3O00110 214 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 WNT9BO14905 357 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 MED6O75586 246 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 FBP1P09467 338 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 CCR6P51684 374 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 DHODHQ02127 395 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 SNTB1Q13884 538 aaKnown RBP6.99□□□□□ -1.29
VPS29-203ENST00000546588 HERPUD1Q15011 391 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 TATDN3Q17R31 274 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 RNASE12Q5GAN4 147 aaKnown RBP6.99□□□□□ -1.29
VPS29-203ENST00000546588 LY6G6FQ5SQ64 297 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 ATAD3CQ5T2N8 411 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 AGAP6Q5VW22 663 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 FAAP20Q6NZ36 180 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 SLC36A1Q7Z2H8 476 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 BPIFB2Q8N4F0 458 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 CD177Q8N6Q3 437 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 OR5T2Q8NGG2 359 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 OR10J5Q8NHC4 309 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 TERB2Q8NHR7 220 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 PLPPR1Q8TBJ4 325 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 ABHD5Q8WTS1 349 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 NEU4Q8WWR8 484 aaPredicted RBP6.99□□□□□ -1.29
VPS29-203ENST00000546588 TCEAL7Q9BRU2 100 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 HDHD3Q9BSH5 251 aaPredicted RBP6.99□□□□□ -1.29
VPS29-203ENST00000546588 COA4Q9NYJ1 87 aa6.99□□□□□ -1.29
VPS29-203ENST00000546588 TRBV6-7A0A0A0MS04 114 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 LRRC30A6NM36 301 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 SNRPGP15A8MWD9 76 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 TMEM238C9JI98 176 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 INMT-MINDY4F8WBC2 141 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 LGALS8O00214 317 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 MGST3O14880 152 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 SIGLEC5O15389 551 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 CGB3P0DN86 165 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 CGB7P0DN87 165 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 ZNF44P15621 663 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 PAX1P15863 534 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 NQO2P16083 231 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 NPY4RP50391 375 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 HLA-DRB3P79483 266 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 CCL8P80075 99 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 COL10A1Q03692 680 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 MSMO1Q15800 293 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 TMEM30BQ3MIR4 351 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 ESCO2Q56NI9 601 aa6.98□□□□□ -1.29
VPS29-203ENST00000546588 PAN3Q58A45 887 aaKnown RBP6.98□□□□□ -1.29
VPS29-203ENST00000546588 ZNF626Q68DY1 528 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms