RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FAM181BA6NEQ2 426 aa16.45■□□□□ 0.22
HMGA2-211ENST00000545998 TIMM23O14925 209 aa16.45■□□□□ 0.22
HMGA2-211ENST00000545998 LANCL1O43813 399 aa16.45■□□□□ 0.22
HMGA2-211ENST00000545998 OR3A3P47888 321 aa16.45■□□□□ 0.22
HMGA2-211ENST00000545998 H1FOOQ8IZA3 346 aaPredicted RBP16.45■□□□□ 0.22
HMGA2-211ENST00000545998 MMP27Q9H306 513 aa16.45■□□□□ 0.22
HMGA2-211ENST00000545998 SAA2-SAA4A0A096LPE2 208 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 A6NDX4 124 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 FAM90A9PA6NNJ1 464 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 SULT1C2O00338 296 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 RAB29O14966 203 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 FCER2P06734 321 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 SAA2P0DJI9 122 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-211ENST00000545998 NAT1P18440 290 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 CD24P25063 80 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 ARPC4P59998 168 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 HABP2Q14520 560 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-211ENST00000545998 CCBE1Q6UXH8 406 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-211ENST00000545998 ZNF833PQ6ZTB9 187 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 TGIF2LXQ8IUE1 241 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 DRAM1Q8N682 238 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 DIRAS2Q96HU8 199 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 ABHD14BQ96IU4 210 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 GHITMQ9H3K2 345 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 PIPOXQ9P0Z9 390 aa16.44■□□□□ 0.22
HMGA2-211ENST00000545998 ANK2Q01484 3957 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 TXNL1O43396 289 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 RPL15P61313 204 aaKnown RBP16.43■□□□□ 0.22
HMGA2-211ENST00000545998 FBLN7Q53RD9 439 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 LIAT1Q6ZQX7 453 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 OR56B4Q8NH76 319 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 C15orf40Q8WUR7 153 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 C19orf24Q9BVV8 132 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 PITPNC1Q9UKF7 332 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 STAB1Q9NY15 2570 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 RNF212BA8MTL3 300 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 TNFSF8P32971 234 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 FAM71F2Q6NXP2 309 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 MOB3BQ86TA1 216 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 OR5AP2Q8NGF4 316 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 MDFIQ99750 246 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 ZNF251Q9BRH9 671 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 RNF150Q9ULK6 438 aa16.43■□□□□ 0.22
HMGA2-211ENST00000545998 A6NHS1 94 aa16.42■□□□□ 0.22
HMGA2-211ENST00000545998 CHST1O43916 411 aa16.42■□□□□ 0.22
HMGA2-211ENST00000545998 NFYAP23511 347 aaPredicted RBP16.42■□□□□ 0.22
HMGA2-211ENST00000545998 TMEM219Q86XT9 240 aa16.42■□□□□ 0.22
HMGA2-211ENST00000545998 THNSL2Q86YJ6 484 aa16.42■□□□□ 0.22
HMGA2-211ENST00000545998 NECAP2Q9NVZ3 263 aa16.42■□□□□ 0.22
HMGA2-211ENST00000545998 SNRNP70P08621 437 aaKnown RBP16.41■□□□□ 0.22
HMGA2-211ENST00000545998 OR8U9P0C7N5 309 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 FAM106CPP0CH98 169 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 RPL39P5Q59GN2 51 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 PYHIN1Q6K0P9 492 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 LYSMD2Q8IV50 215 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 OR8U1Q8NH10 309 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 OR52I2Q8NH67 350 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 CAPSLQ8WWF8 208 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 TAF15Q92804 592 aaKnown RBP eCLIP16.41■□□□□ 0.22
HMGA2-211ENST00000545998 S1PR3Q99500 378 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 RAB18Q9NP72 206 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 RABL2AQ9UBK7 228 aaPredicted RBP16.41■□□□□ 0.22
HMGA2-211ENST00000545998 RABL2BQ9UNT1 228 aa16.41■□□□□ 0.22
HMGA2-211ENST00000545998 PROP1O75360 226 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 TUSC2O75896 110 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 CRYBA1P05813 215 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 HKR1P10072 659 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 RCVRNP35243 200 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 GPR12P47775 334 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 IL18Q14116 193 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 CDK10Q15131 360 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 DHRS7BQ6IAN0 325 aaPredicted RBP16.4■□□□□ 0.22
HMGA2-211ENST00000545998 SOSTQ9BQB4 213 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 MRPL20Q9BYC9 149 aaKnown RBP16.4■□□□□ 0.22
HMGA2-211ENST00000545998 OR2D2Q9H210 308 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 C1RLQ9NZP8 487 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 ZNF221Q9UK13 617 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 OR2W1Q9Y3N9 320 aa16.4■□□□□ 0.22
HMGA2-211ENST00000545998 IGHV3-72A0A0B4J1Y9 119 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 OR5H8P0DN80 308 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 CD1BP29016 333 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 ACTG1P63261 375 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 RELBQ01201 579 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 EBI3Q14213 229 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 RNASE12Q5GAN4 147 aaKnown RBP16.39■□□□□ 0.21
HMGA2-211ENST00000545998 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.39■□□□□ 0.21
HMGA2-211ENST00000545998 NABP2Q9BQ15 211 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 KLK11Q9UBX7 282 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 GAB2Q9UQC2 676 aa16.39■□□□□ 0.21
HMGA2-211ENST00000545998 ZNF736B4DX44 427 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-211ENST00000545998 GABARAPH6UMI1 98 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 CTDSPLO15194 276 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 IGKV1D-33P01593 117 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 IGKV1-33P01594 117 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 TAS2R46P59540 309 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 MRPS10P82664 201 aaKnown RBP16.38■□□□□ 0.21
HMGA2-211ENST00000545998 DGCR2P98153 550 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 LSAMPQ13449 338 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 OVCH2Q7RTZ1 564 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 FCAMRQ8WWV6 532 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms