RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 KIAA1456Q9P272 454 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 SLC23A1Q9UHI7 598 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 CPEP16870 476 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 RAB11BQ15907 218 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 C5orf64Q2M2E5 130 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 NPBQ8NG41 125 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 CCDC90BQ9GZT6 254 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 AK3Q9UIJ7 227 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 HSF4Q9ULV5 492 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 MGAT4AQ9UM21 535 aa17.76■□□□□ 0.43
CHD4-214ENST00000545942 AK6Q9Y3D8 172 aaKnown RBP17.76■□□□□ 0.43
CHD4-214ENST00000545942 ATP6V0E1O15342 81 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 NDUFA3O95167 84 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 CRHBPP24387 322 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 PPIFP30405 207 aaKnown RBP17.75■□□□□ 0.43
CHD4-214ENST00000545942 LIN54Q6MZP7 749 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 FAM131AQ6UXB0 335 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 PRSS48Q7RTY5 328 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 MYOZ3Q8TDC0 251 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 HDHD3Q9BSH5 251 aaPredicted RBP17.75■□□□□ 0.43
CHD4-214ENST00000545942 GHITMQ9H3K2 345 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 PARP11Q9NR21 331 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 WSB1Q9Y6I7 421 aa17.75■□□□□ 0.43
CHD4-214ENST00000545942 IGHV7-81A0A0B4J1V7 117 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 G3V318 75 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 ITGB1BP1O14713 200 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 DGCR2P98153 550 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 DCTN2Q13561 401 aaKnown RBP17.74■□□□□ 0.43
CHD4-214ENST00000545942 RPL39P5Q59GN2 51 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 TMEM65Q6PI78 240 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 MGLLQ99685 303 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 VCX3BQ9H321 246 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 C12orf4Q9NQ89 552 aa17.74■□□□□ 0.43
CHD4-214ENST00000545942 OR5H14A6NHG9 310 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 FOXI3A8MTJ6 420 aaPredicted RBP17.73■□□□□ 0.43
CHD4-214ENST00000545942 CT45A6P0DMU7 189 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 CT45A5P0DMU8 189 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 CT45A7P0DMV0 189 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 ZBTB25P24278 435 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 CALRP27797 417 aaKnown RBP17.73■□□□□ 0.43
CHD4-214ENST00000545942 RANBP1P43487 201 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 HLA-DRB3P79483 266 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 FHL3Q13643 280 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 UBE2E2Q96LR5 201 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 AGMATQ9BSE5 352 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 PARP12Q9H0J9 701 aaKnown RBP17.73■□□□□ 0.43
CHD4-214ENST00000545942 ACOT13Q9NPJ3 140 aa17.73■□□□□ 0.43
CHD4-214ENST00000545942 TRAV41A0A0B4J266 112 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 HSPA12AO43301 675 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 RAMP3O60896 148 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 MC5RP33032 325 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 CEACAM6P40199 344 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 VEGFCP49767 419 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 TMEM50BP56557 158 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 FABP5Q01469 135 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 VAX1Q5SQQ9 334 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 C9orf66Q5T8R8 295 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 EDARADDQ8WWZ3 215 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 FAM3DQ96BQ1 224 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 ARHGAP5-AS1Q96IT6 56 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 ABHD14BQ96IU4 210 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 KLK15Q9H2R5 256 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 Q9N2K0 584 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 OR1A1Q9P1Q5 309 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 IGLV1-40P01703 118 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 MAP2K4P45985 399 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 PSMD7P51665 324 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 LUMP51884 338 aaPredicted RBP17.72■□□□□ 0.43
CHD4-214ENST00000545942 CLDN12P56749 244 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 ZNF491Q8N8L2 437 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 OR11H1Q8NG94 326 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 OR56B1Q8NGI3 324 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 C11orf54Q9H0W9 315 aaPredicted RBP17.72■□□□□ 0.43
CHD4-214ENST00000545942 V9GY05 133 aa17.72■□□□□ 0.43
CHD4-214ENST00000545942 H0YJW9 148 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 SCTP09683 121 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 CD69Q07108 199 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 KIAA0141Q14154 515 aaPredicted RBP17.71■□□□□ 0.42
CHD4-214ENST00000545942 C2orf76Q3KRA6 126 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 GLDNQ6ZMI3 551 aaPredicted RBP17.71■□□□□ 0.42
CHD4-214ENST00000545942 MINDY2Q8NBR6 621 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 OR5AN1Q8NGI8 311 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 B9D2Q9BPU9 175 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 CMSS1Q9BQ75 279 aaKnown RBP17.71■□□□□ 0.42
CHD4-214ENST00000545942 PECRQ9BY49 303 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 FBXL15Q9H469 300 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 VSIG4Q9Y279 399 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 WASHC3Q9Y3C0 194 aa17.71■□□□□ 0.42
CHD4-214ENST00000545942 SEC14L6B5MCN3 397 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 H7C2Y5 167 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 RRHO14718 337 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 RBBP9O75884 186 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 GSTP1P09211 210 aaKnown RBP17.7■□□□□ 0.42
CHD4-214ENST00000545942 HSPA13P48723 471 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 RAB9AP51151 201 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 RUNX1Q01196 453 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 PLGLAQ15195 96 aa17.7■□□□□ 0.42
CHD4-214ENST00000545942 TBCEQ15813 527 aaPredicted RBP17.7■□□□□ 0.42
CHD4-214ENST00000545942 ZNF660Q6AZW8 331 aaPredicted RBP17.7■□□□□ 0.42
CHD4-214ENST00000545942 PTX4Q96A99 478 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms