RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 MALSU1Q96EH3 234 aa8.32□□□□□ -1.08
DDX11-229ENST00000545668 PLPPR2Q96GM1 343 aa8.32□□□□□ -1.08
DDX11-229ENST00000545668 HIST1H2BLQ99880 126 aa8.32□□□□□ -1.08
DDX11-229ENST00000545668 C12orf49Q9H741 205 aa8.32□□□□□ -1.08
DDX11-229ENST00000545668 ASCL3Q9NQ33 180 aa8.32□□□□□ -1.08
DDX11-229ENST00000545668 PTPRZ1P23471 2315 aaPredicted RBP8.31□□□□□ -1.08
DDX11-229ENST00000545668 IGSF23A1L1A6 192 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 CLDN1O95832 211 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 SELEP16581 610 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 BCL3P20749 454 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 FUT6P51993 359 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 TMPRSS7Q7RTY8 843 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 STARD10Q9Y365 291 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 POMT1Q9Y6A1 747 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 ZNF816-ZNF321PA0A0X1KG74 233 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 Q6ZSR3 168 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 ATP5SQ99766 215 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 C2orf88Q9BSF0 95 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 RIF1Q5UIP0 2472 aaKnown RBP8.31□□□□□ -1.08
DDX11-229ENST00000545668 CEACAM1P13688 526 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 CHRNA7P36544 502 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 FOXG1P55316 489 aaPredicted RBP8.31□□□□□ -1.08
DDX11-229ENST00000545668 PMP22Q01453 160 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 ZNF766Q5HY98 468 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 ATOH7Q8N100 152 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 MDS2Q8NDY4 140 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 CIB3Q96Q77 187 aaPredicted RBP8.31□□□□□ -1.08
DDX11-229ENST00000545668 VAMP8Q9BV40 100 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 LINC00470Q9BZP3 86 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 TRAPPC2LQ9UL33 140 aa8.31□□□□□ -1.08
DDX11-229ENST00000545668 SIRPB1O00241 398 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 IRF2P14316 349 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 ERVFRD-1P60508 538 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 RNPS1Q15287 305 aaKnown RBP8.3□□□□□ -1.08
DDX11-229ENST00000545668 NRN1LQ496H8 165 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 ZNF787Q6DD87 383 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 HIST3H2BBQ8N257 126 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 ZNF808Q8N4W9 903 aaPredicted RBP8.3□□□□□ -1.08
DDX11-229ENST00000545668 TM2D1Q9BX74 207 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 ARV1Q9H2C2 271 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 hCG_38984A0A1B0GV85 526 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 FTH1P19P0C7X4 201 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 CHRNB4P30926 498 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 CCL11P51671 97 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 ZNF818PQ6ZRF7 136 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 SMIM15Q7Z3B0 74 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 TMEM178AQ8NBL3 297 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 RAB24Q969Q5 203 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 PARD6GQ9BYG4 376 aaPredicted RBP8.3□□□□□ -1.08
DDX11-229ENST00000545668 ZNF665Q9H7R5 613 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 SLC39A9Q9NUM3 307 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 RIPPLY3P57055 190 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 SPINK9Q5DT21 86 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 SAPCD1Q5SSQ6 148 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 Q6ZN92 141 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 GNPNAT1Q96EK6 184 aaPredicted RBP8.3□□□□□ -1.08
DDX11-229ENST00000545668 CACNG5Q9UF02 275 aa8.3□□□□□ -1.08
DDX11-229ENST00000545668 POLEQ07864 2286 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 TRGV5A0A0B4J1U4 118 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 NKX2-8O15522 239 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 IGHV2-5P01817 119 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 RAB7AP51149 207 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 SRPXP78539 464 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 PRDX4Q13162 271 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 C1orf185Q5T7R7 199 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 NUFIP2Q7Z417 695 aaKnown RBP8.29□□□□□ -1.08
DDX11-229ENST00000545668 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
DDX11-229ENST00000545668 BOD1Q96IK1 185 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 C1QTNF5Q9BXJ0 243 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 TUBD1Q9UJT1 453 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 CLDN34H7C241 214 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 KRASP01116 189 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 DTYMKP23919 212 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 CLN3Q13286 438 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 KRTAP27-1Q3LI81 207 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 LEMD1Q68G75 181 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 LHX4Q969G2 390 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 NOL4LQ96MY1 436 aaPredicted RBP8.29□□□□□ -1.08
DDX11-229ENST00000545668 NEU1Q99519 415 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 PRDM14Q9GZV8 571 aa8.29□□□□□ -1.08
DDX11-229ENST00000545668 ANKRD30BLA7E2S9 258 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 TRDCB7Z8K6 153 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 HNRNPA3P51991 378 aaKnown RBP8.28□□□□□ -1.08
DDX11-229ENST00000545668 RBM11P57052 281 aaKnown RBP8.28□□□□□ -1.08
DDX11-229ENST00000545668 OR8B8Q15620 311 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 Q8NFD4 153 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 FAM234AQ9H0X4 552 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 ANAPC10Q9UM13 185 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 GRIFINA4D1Z8 144 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 FOXI3A8MTJ6 420 aaPredicted RBP8.28□□□□□ -1.08
DDX11-229ENST00000545668 A8MWP6 167 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 RPL36A-HNRNPH2H7BZ11 118 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 HBE1P02100 147 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 GRPP07492 148 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 PSG2P11465 335 aa8.28□□□□□ -1.08
DDX11-229ENST00000545668 CDC34P49427 236 aaPredicted RBP8.28□□□□□ -1.08
DDX11-229ENST00000545668 TGFBR3Q03167 851 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms