RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 S1PR3Q99500 378 aa9.03□□□□□ -0.96
YBX3-216ENST00000544622 C11orf54Q9H0W9 315 aaPredicted RBP9.03□□□□□ -0.96
YBX3-216ENST00000544622 LIN7CQ9NUP9 197 aaKnown RBP9.03□□□□□ -0.96
YBX3-216ENST00000544622 PIPOXQ9P0Z9 390 aa9.03□□□□□ -0.96
YBX3-216ENST00000544622 OR1A1Q9P1Q5 309 aa9.03□□□□□ -0.96
YBX3-216ENST00000544622 DAPK2Q9UIK4 370 aa9.03□□□□□ -0.96
YBX3-216ENST00000544622 ELF5Q9UKW6 265 aaPredicted RBP9.03□□□□□ -0.96
YBX3-216ENST00000544622 TMEM127O75204 238 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 PEX14O75381 377 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 OPN1MWP04001 364 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 CLEC2LP0C7M8 214 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 GSTT2P0CG29 244 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 GSTT2BP0CG30 244 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 CT45A6P0DMU7 189 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 CT45A5P0DMU8 189 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 CT45A7P0DMV0 189 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 OPN1MW2P0DN77 364 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 OPN1MW3P0DN78 364 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 ZNF260Q3ZCT1 412 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 OR4A4PQ8NGN8 299 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 FAM110DQ8TAY7 271 aaPredicted RBP9.02□□□□□ -0.97
YBX3-216ENST00000544622 CABLES2Q9BTV7 478 aa9.02□□□□□ -0.97
YBX3-216ENST00000544622 MRPL20Q9BYC9 149 aaKnown RBP9.02□□□□□ -0.97
YBX3-216ENST00000544622 PRKDCP78527 4128 aaKnown RBP9.02□□□□□ -0.97
YBX3-216ENST00000544622 TRBV6-7A0A0A0MS04 114 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 LOC100506127A0A0U1RQW1 187 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
YBX3-216ENST00000544622 FABP7O15540 132 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 CD3GP09693 182 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 SNRPBP14678 240 aaKnown RBP9.01□□□□□ -0.97
YBX3-216ENST00000544622 MXD1Q05195 221 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 ARL6IP1Q15041 203 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 CDNFQ49AH0 187 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 RPL39P5Q59GN2 51 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 IGSF11Q5DX21 431 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 ARSJQ5FYB0 599 aaPredicted RBP9.01□□□□□ -0.97
YBX3-216ENST00000544622 C9orf152Q5JTZ5 239 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 HACD4Q5VWC8 232 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 NPBQ8NG41 125 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 OR5AN1Q8NGI8 311 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 EDARADDQ8WWZ3 215 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 ABHD14BQ96IU4 210 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 NOL4LQ96MY1 436 aaPredicted RBP9.01□□□□□ -0.97
YBX3-216ENST00000544622 ATG5Q9H1Y0 275 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 RDH8Q9NYR8 311 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 ZNF230Q9UIE0 474 aaPredicted RBP9.01□□□□□ -0.97
YBX3-216ENST00000544622 GAB2Q9UQC2 676 aa9.01□□□□□ -0.97
YBX3-216ENST00000544622 IGKV1D-8A0A087WSZ0 117 aa9□□□□□ -0.97
YBX3-216ENST00000544622 NDUFA3O95167 84 aa9□□□□□ -0.97
YBX3-216ENST00000544622 IGF1P05019 195 aa9□□□□□ -0.97
YBX3-216ENST00000544622 DTYMKP23919 212 aa9□□□□□ -0.97
YBX3-216ENST00000544622 TGFBR1P36897 503 aa9□□□□□ -0.97
YBX3-216ENST00000544622 GPR12P47775 334 aa9□□□□□ -0.97
YBX3-216ENST00000544622 SERPINB10P48595 397 aa9□□□□□ -0.97
YBX3-216ENST00000544622 KIR2DS1Q14954 304 aa9□□□□□ -0.97
YBX3-216ENST00000544622 TIMM50Q3ZCQ8 353 aa9□□□□□ -0.97
YBX3-216ENST00000544622 SLC35E3Q7Z769 313 aa9□□□□□ -0.97
YBX3-216ENST00000544622 ZNF329Q86UD4 541 aa9□□□□□ -0.97
YBX3-216ENST00000544622 STPG2Q8N412 459 aa9□□□□□ -0.97
YBX3-216ENST00000544622 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
YBX3-216ENST00000544622 OR5H6Q8NGV6 325 aa9□□□□□ -0.97
YBX3-216ENST00000544622 LGALS14Q8TCE9 139 aa9□□□□□ -0.97
YBX3-216ENST00000544622 CHPT1Q8WUD6 406 aa9□□□□□ -0.97
YBX3-216ENST00000544622 SLC25A38Q96DW6 304 aa9□□□□□ -0.97
YBX3-216ENST00000544622 HSPB9Q9BQS6 159 aa9□□□□□ -0.97
YBX3-216ENST00000544622 DCSTAMPQ9H295 470 aa9□□□□□ -0.97
YBX3-216ENST00000544622 ZNF580Q9UK33 172 aa9□□□□□ -0.97
YBX3-216ENST00000544622 DNAH3Q8TD57 4116 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 A0A075B6Q4 140 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 PSMB11A5LHX3 300 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 H0YJW9 148 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 HSPA12AO43301 675 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 SCGNO76038 276 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 GSTP1P09211 210 aaKnown RBP8.99□□□□□ -0.97
YBX3-216ENST00000544622 CNTFRP26992 372 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 MC5RP33032 325 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 RPS19P39019 145 aaKnown RBP8.99□□□□□ -0.97
YBX3-216ENST00000544622 ACTBP60709 375 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 CFHR3Q02985 330 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 NSUN5P1Q3KNT7 163 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 OR4X2Q8NGF9 303 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 RNF5Q99942 180 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 RASL11BQ9BPW5 248 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 RHBDL2Q9NX52 303 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 LINC00527Q9UJ94 153 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 SPATA2Q9UM82 520 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 TSSC4Q9Y5U2 329 aaPredicted RBP8.99□□□□□ -0.97
YBX3-216ENST00000544622 ETV7Q9Y603 341 aa8.99□□□□□ -0.97
YBX3-216ENST00000544622 OR5H14A6NHG9 310 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 AP4M1O00189 453 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 KCNAB3O43448 404 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 AIREO43918 545 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 SSX5O60225 188 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 SOX6P35712 828 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 LINC00205P59089 165 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 MRPS15P82914 257 aaKnown RBP8.98□□□□□ -0.97
YBX3-216ENST00000544622 MMDQ15546 238 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 PNLIPRP3Q17RR3 467 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 IDNKQ5T6J7 187 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms