RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 C14orf79Q96F83 325 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 C20orf24Q9BUV8 137 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 HIPK2Q9H2X6 1198 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 COA4Q9NYJ1 87 aa15.09■□□□□ 0.01
VIM-209ENST00000544301 TLE4Q04727 773 aa15.08■□□□□ 0.01
VIM-209ENST00000544301 CD177Q8N6Q3 437 aa15.08■□□□□ 0.01
VIM-209ENST00000544301 OR13A1Q8NGR1 328 aa15.08■□□□□ 0.01
VIM-209ENST00000544301 LRRC29Q8WV35 223 aa15.08■□□□□ 0.01
VIM-209ENST00000544301 LURAP1Q96LR2 239 aa15.08■□□□□ 0.01
VIM-209ENST00000544301 FAM90A26D6RGX4 464 aa15.08■□□□□ 0
VIM-209ENST00000544301 P0C879 139 aa15.08■□□□□ 0
VIM-209ENST00000544301 SSTR5P35346 364 aa15.08■□□□□ 0
VIM-209ENST00000544301 RAB13P51153 203 aa15.08■□□□□ 0
VIM-209ENST00000544301 UBE2KP61086 200 aa15.08■□□□□ 0
VIM-209ENST00000544301 MSMPQ1L6U9 139 aa15.08■□□□□ 0
VIM-209ENST00000544301 OR2B11Q5JQS5 317 aa15.08■□□□□ 0
VIM-209ENST00000544301 SOHLH1Q5JUK2 328 aa15.08■□□□□ 0
VIM-209ENST00000544301 IGFL3Q6UXB1 125 aa15.08■□□□□ 0
VIM-209ENST00000544301 OR2Z1Q8NG97 314 aa15.08■□□□□ 0
VIM-209ENST00000544301 EGLN1Q9GZT9 426 aa15.08■□□□□ 0
VIM-209ENST00000544301 MZT1Q08AG7 82 aa15.07■□□□□ 0
VIM-209ENST00000544301 ZNF816Q0VGE8 651 aaPredicted RBP15.07■□□□□ 0
VIM-209ENST00000544301 MSMO1Q15800 293 aa15.07■□□□□ 0
VIM-209ENST00000544301 HAGHQ16775 308 aa15.07■□□□□ 0
VIM-209ENST00000544301 SCGB1C1Q8TD33 95 aa15.07■□□□□ 0
VIM-209ENST00000544301 RSG1Q9BU20 258 aa15.07■□□□□ 0
VIM-209ENST00000544301 KRASP01116 189 aa15.07■□□□□ 0
VIM-209ENST00000544301 FOLR2P14207 255 aa15.07■□□□□ 0
VIM-209ENST00000544301 PRDX2P32119 198 aa15.07■□□□□ 0
VIM-209ENST00000544301 G6PCP35575 357 aa15.07■□□□□ 0
VIM-209ENST00000544301 ZNF83P51522 516 aa15.07■□□□□ 0
VIM-209ENST00000544301 BRWD1-AS2P59051 145 aa15.07■□□□□ 0
VIM-209ENST00000544301 HBG1P69891 147 aa15.07■□□□□ 0
VIM-209ENST00000544301 HBG2P69892 147 aa15.07■□□□□ 0
VIM-209ENST00000544301 TNFRSF9Q07011 255 aa15.07■□□□□ 0
VIM-209ENST00000544301 SPANXN5Q5MJ07 72 aa15.07■□□□□ 0
VIM-209ENST00000544301 LRP11Q86VZ4 500 aa15.07■□□□□ 0
VIM-209ENST00000544301 RBKSQ9H477 322 aa15.07■□□□□ 0
VIM-209ENST00000544301 TUBA4BQ9H853 241 aa15.07■□□□□ 0
VIM-209ENST00000544301 C17orf98A8MV24 154 aa15.06■□□□□ 0
VIM-209ENST00000544301 HBE1P02100 147 aa15.06■□□□□ 0
VIM-209ENST00000544301 DAOP14920 347 aa15.06■□□□□ 0
VIM-209ENST00000544301 EGR1P18146 543 aa15.06■□□□□ 0
VIM-209ENST00000544301 CATR1Q13166 79 aa15.06■□□□□ 0
VIM-209ENST00000544301 ICAM4Q14773 271 aa15.06■□□□□ 0
VIM-209ENST00000544301 RHEBQ15382 184 aa15.06■□□□□ 0
VIM-209ENST00000544301 BTNL3Q6UXE8 466 aa15.06■□□□□ 0
VIM-209ENST00000544301 RFESDQ8TAC1 157 aa15.06■□□□□ 0
VIM-209ENST00000544301 TCTEX1D2Q8WW35 142 aa15.06■□□□□ 0
VIM-209ENST00000544301 HIST1H2BAQ96A08 127 aa15.06■□□□□ 0
VIM-209ENST00000544301 HSPB7Q9UBY9 170 aa15.06■□□□□ 0
VIM-209ENST00000544301 ZNF292O60281 2723 aa15.06■□□□□ 0
VIM-209ENST00000544301 IGHV3-43A0A0B4J1X8 118 aa15.05■□□□□ 0
VIM-209ENST00000544301 S1PR2O95136 353 aa15.05■□□□□ 0
VIM-209ENST00000544301 SRP19P09132 144 aaKnown RBP15.05■□□□□ 0
VIM-209ENST00000544301 IGHV3-43DP0DP04 118 aa15.05■□□□□ 0
VIM-209ENST00000544301 EIF2S3P41091 472 aaKnown RBP15.05■□□□□ 0
VIM-209ENST00000544301 NUBP1P53384 320 aa15.05■□□□□ 0
VIM-209ENST00000544301 PAX5Q02548 391 aa15.05■□□□□ 0
VIM-209ENST00000544301 LRRC75BQ2VPJ9 315 aa15.05■□□□□ 0
VIM-209ENST00000544301 ZNF506Q5JVG8 444 aa15.05■□□□□ 0
VIM-209ENST00000544301 ALKBH2Q6NS38 261 aa15.05■□□□□ 0
VIM-209ENST00000544301 ZNF474Q6S9Z5 364 aaPredicted RBP15.05■□□□□ 0
VIM-209ENST00000544301 CLDND2Q8NHS1 167 aa15.05■□□□□ 0
VIM-209ENST00000544301 RBMXL1Q96E39 390 aaKnown RBP15.05■□□□□ 0
VIM-209ENST00000544301 DCTN5Q9BTE1 182 aa15.05■□□□□ 0
VIM-209ENST00000544301 DUSP13Q9UII6 198 aa15.05■□□□□ 0
VIM-209ENST00000544301 FAM215AQ9Y5M1 114 aa15.05■□□□□ 0
VIM-209ENST00000544301 KLF2Q9Y5W3 355 aaPredicted RBP15.05■□□□□ 0
VIM-209ENST00000544301 HEATR1Q9H583 2144 aaKnown RBP15.05■□□□□ 0
VIM-209ENST00000544301 CHD3Q12873 2000 aaKnown RBP15.05■□□□□ -0
VIM-209ENST00000544301 TRAV1-1A0A0B4J248 108 aa15.05■□□□□ -0
VIM-209ENST00000544301 C15orf65H3BRN8 121 aa15.05■□□□□ -0
VIM-209ENST00000544301 PPIHO43447 177 aaKnown RBP15.05■□□□□ -0
VIM-209ENST00000544301 SCAF4O95104 1147 aaKnown RBP15.05■□□□□ -0
VIM-209ENST00000544301 OR8U8P0C7N1 319 aa15.05■□□□□ -0
VIM-209ENST00000544301 RAB2AP61019 212 aa15.05■□□□□ -0
VIM-209ENST00000544301 LILRB2Q8N423 598 aa15.05■□□□□ -0
VIM-209ENST00000544301 S100PBPQ96BU1 408 aa15.05■□□□□ -0
VIM-209ENST00000544301 PSMG3Q9BT73 122 aaPredicted RBP15.05■□□□□ -0
VIM-209ENST00000544301 PUS1Q9Y606 427 aaKnown RBP eCLIP15.05■□□□□ -0
VIM-209ENST00000544301 SVILO95425 2214 aa15.05■□□□□ -0
VIM-209ENST00000544301 SRRM5B3KS81 715 aa15.04■□□□□ -0
VIM-209ENST00000544301 M0R1B8 84 aa15.04■□□□□ -0
VIM-209ENST00000544301 ZNF737O75373 536 aa15.04■□□□□ -0
VIM-209ENST00000544301 CLDN1O95832 211 aa15.04■□□□□ -0
VIM-209ENST00000544301 TMEM14EPQ6UXP3 125 aa15.04■□□□□ -0
VIM-209ENST00000544301 Q6ZS92 163 aa15.04■□□□□ -0
VIM-209ENST00000544301 ZFP82Q8N141 532 aa15.04■□□□□ -0
VIM-209ENST00000544301 RPRMLQ8N4K4 120 aa15.04■□□□□ -0
VIM-209ENST00000544301 RPRMQ9NS64 109 aa15.04■□□□□ -0
VIM-209ENST00000544301 BOD1L1Q8NFC6 3051 aa15.04■□□□□ -0
VIM-209ENST00000544301 CACNA1DQ01668 2161 aa15.04■□□□□ -0
VIM-209ENST00000544301 IGKV1D-17A0A075B6S4 117 aa15.04■□□□□ -0
VIM-209ENST00000544301 ODAMA1E959 279 aa15.04■□□□□ -0
VIM-209ENST00000544301 LRRC30A6NM36 301 aa15.04■□□□□ -0
VIM-209ENST00000544301 DEFB108AA8MXU0 73 aa15.04■□□□□ -0
VIM-209ENST00000544301 SPINT2O43291 252 aa15.04■□□□□ -0
VIM-209ENST00000544301 HSPB1P04792 205 aaKnown RBP15.04■□□□□ -0
VIM-209ENST00000544301 HTD2P86397 168 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms