RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 KIR2DS1Q14954 304 aa18.38■□□□□ 0.53
CHFR-222ENST00000544093 KHDC1LQ5JSQ8 128 aa18.38■□□□□ 0.53
CHFR-222ENST00000544093 PHF21AQ96BD5 680 aa18.38■□□□□ 0.53
CHFR-222ENST00000544093 A0A1W2PRX2 142 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 RAB27BO00194 218 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 ST8SIA5O15466 376 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 SOX6P35712 828 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 OR3A3P47888 321 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 MMDQ15546 238 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 PDLIM3Q53GG5 364 aaPredicted RBP18.37■□□□□ 0.53
CHFR-222ENST00000544093 OR4A4PQ8NGN8 299 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 KCTD7Q96MP8 289 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 NOL4LQ96MY1 436 aaPredicted RBP18.37■□□□□ 0.53
CHFR-222ENST00000544093 AGMATQ9BSE5 352 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 ZFP57Q9NU63 452 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 ZNF580Q9UK33 172 aa18.37■□□□□ 0.53
CHFR-222ENST00000544093 OR5H14A6NHG9 310 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 SCGNO76038 276 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 SCTP09683 121 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 HIST1H1DP16402 221 aaKnown RBP18.36■□□□□ 0.53
CHFR-222ENST00000544093 MC5RP33032 325 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 F2RL1P55085 397 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 ACTBP60709 375 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 PLA2G7Q13093 441 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 TEX38Q6PEX7 206 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 ZNF329Q86UD4 541 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 NR2C2APQ86WQ0 139 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 ZNF251Q9BRH9 671 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 KCNK7Q9Y2U2 307 aa18.36■□□□□ 0.53
CHFR-222ENST00000544093 NOTCH3Q9UM47 2321 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 MFNGO00587 321 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 PF4P02776 101 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 MOGAT2Q3SYC2 334 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 SAMD5Q5TGI4 173 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 C10orf99Q6UWK7 81 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 CHCHD6Q9BRQ6 235 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 C11orf54Q9H0W9 315 aaPredicted RBP18.35■□□□□ 0.53
CHFR-222ENST00000544093 ATG5Q9H1Y0 275 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 OR1A1Q9P1Q5 309 aa18.35■□□□□ 0.53
CHFR-222ENST00000544093 NBR2O15453 112 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 FABP7O15540 132 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 FCGR3AP08637 254 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 OR5H8P0DN80 308 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 GNB3P16520 340 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 TALDO1P37837 337 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 SCAND1P57086 179 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 SRSF7Q16629 238 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHFR-222ENST00000544093 PNLIPRP3Q17RR3 467 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 KPRPQ5T749 579 aaPredicted RBP18.34■□□□□ 0.53
CHFR-222ENST00000544093 WFDC9Q8NEX5 89 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 TOLLIPQ9H0E2 274 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 KIAA1456Q9P272 454 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 ZNF221Q9UK13 617 aa18.34■□□□□ 0.53
CHFR-222ENST00000544093 RBBP9O75884 186 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 IGF1P05019 195 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 SLC2A2P11168 524 aaPredicted RBP18.33■□□□□ 0.52
CHFR-222ENST00000544093 CD33P20138 364 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 RPL23AP62750 156 aaKnown RBP18.33■□□□□ 0.52
CHFR-222ENST00000544093 ARFRP1Q13795 201 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 NEDD8Q15843 81 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 SFXN4Q6P4A7 337 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 C1QL4Q86Z23 238 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 OR51E2Q9H255 320 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 VCX3AQ9NNX9 186 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.33■□□□□ 0.52
CHFR-222ENST00000544093 ZNF107Q9UII5 783 aaPredicted RBP18.33■□□□□ 0.52
CHFR-222ENST00000544093 DAPK2Q9UIK4 370 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 LINC00527Q9UJ94 153 aa18.33■□□□□ 0.52
CHFR-222ENST00000544093 A0A075B6Q4 140 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 A0A0B4J203 849 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 G3V4G9 280 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 TMEM127O75204 238 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 HLA-DRB1P01911 266 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 CD36P16671 472 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 VDAC1P21796 283 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 TIMM50Q3ZCQ8 353 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 RPL39P5Q59GN2 51 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 Q6ZS49 121 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.32■□□□□ 0.52
CHFR-222ENST00000544093 NPBQ8NG41 125 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 OR10J5Q8NHC4 309 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 ABHD14BQ96IU4 210 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 RNF5Q99942 180 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 CABLES2Q9BTV7 478 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 PARP12Q9H0J9 701 aaKnown RBP18.32■□□□□ 0.52
CHFR-222ENST00000544093 RDH8Q9NYR8 311 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 WASHC3Q9Y3C0 194 aa18.32■□□□□ 0.52
CHFR-222ENST00000544093 IGKV1-6A0A0C4DH72 117 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 LINC01548A6NM66 108 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 CT45A6P0DMU7 189 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 CT45A5P0DMU8 189 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 CT45A7P0DMV0 189 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 SDC2P34741 201 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 FOXE3Q13461 319 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 BEAN1Q3B7T3 259 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 FAM131AQ6UXB0 335 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 OR5AN1Q8NGI8 311 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 HSPB9Q9BQS6 159 aa18.31■□□□□ 0.52
CHFR-222ENST00000544093 LOC100506127A0A0U1RQW1 187 aa18.3■□□□□ 0.52
CHFR-222ENST00000544093 SMIM30A4D0T7 59 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms