RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ABHD14BQ96IU4 210 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 AGMATQ9BSE5 352 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 NXF2Q9GZY0 626 aaKnown RBP12.11□□□□□ -0.47
CD9-210ENST00000543916 C1RLQ9NZP8 487 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 ANAPC10Q9UM13 185 aa12.11□□□□□ -0.47
CD9-210ENST00000543916 FAM90A9PA6NNJ1 464 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 LANCL1O43813 399 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 SNRNP70P08621 437 aaKnown RBP12.1□□□□□ -0.47
CD9-210ENST00000543916 HKR1P10072 659 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 RPL15P61313 204 aaKnown RBP12.1□□□□□ -0.47
CD9-210ENST00000543916 HABP2Q14520 560 aaPredicted RBP12.1□□□□□ -0.47
CD9-210ENST00000543916 CNIH2Q6PI25 160 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 ZNF833PQ6ZTB9 187 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 TGIF2LXQ8IUE1 241 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 H1FOOQ8IZA3 346 aaPredicted RBP12.1□□□□□ -0.47
CD9-210ENST00000543916 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
CD9-210ENST00000543916 ZNF251Q9BRH9 671 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 GINS4Q9BRT9 223 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 C6orf62Q9GZU0 229 aaPredicted RBP12.1□□□□□ -0.47
CD9-210ENST00000543916 IFT46Q9NQC8 304 aa12.1□□□□□ -0.47
CD9-210ENST00000543916 IGHV3-72A0A0B4J1Y9 119 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 TMEM89A2RUT3 159 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 RPL39P5Q59GN2 51 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 DHRS7BQ6IAN0 325 aaPredicted RBP12.09□□□□□ -0.47
CD9-210ENST00000543916 LIAT1Q6ZQX7 453 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 CAPSLQ8WWF8 208 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 MRPL20Q9BYC9 149 aaKnown RBP12.09□□□□□ -0.47
CD9-210ENST00000543916 ADAM30Q9UKF2 790 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 PITPNC1Q9UKF7 332 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 RNF150Q9ULK6 438 aa12.09□□□□□ -0.47
CD9-210ENST00000543916 ZNF736B4DX44 427 aaPredicted RBP12.08□□□□□ -0.48
CD9-210ENST00000543916 RAB29O14966 203 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 TXNL1O43396 289 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 CRYBA1P05813 215 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 LPLP06858 475 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.48
CD9-210ENST00000543916 ARPC4P59998 168 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 RNASE12Q5GAN4 147 aaKnown RBP12.08□□□□□ -0.48
CD9-210ENST00000543916 DGCR14Q96DF8 476 aaKnown RBP12.08□□□□□ -0.48
CD9-210ENST00000543916 ABHD1Q96SE0 405 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 NABP2Q9BQ15 211 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 NDUFA13Q9P0J0 144 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 PIPOXQ9P0Z9 390 aa12.08□□□□□ -0.48
CD9-210ENST00000543916 PROP1O75360 226 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 NDUFA7O95182 113 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 IGKV1D-33P01593 117 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 IGKV1-33P01594 117 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 NAT1P18440 290 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 RAG2P55895 527 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 LSAMPQ13449 338 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 FAM71F2Q6NXP2 309 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 Q6ZSV7 163 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 THNSL2Q86YJ6 484 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 OR5AP2Q8NGF4 316 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 OR2D2Q9H210 308 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 SCPEP1Q9HB40 452 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 RAB18Q9NP72 206 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 COL6A5A8TX70 2615 aa12.07□□□□□ -0.48
CD9-210ENST00000543916 J3QRK9 145 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 SULT1C2O00338 296 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 FAM106CPP0CH98 169 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 MDKP21741 143 aaPredicted RBP12.06□□□□□ -0.48
CD9-210ENST00000543916 CD1BP29016 333 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 GPR12P47775 334 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 EBI3Q14213 229 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 HES1Q14469 280 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 CDK10Q15131 360 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 OR52I2Q8NH67 350 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 DIRAS2Q96HU8 199 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
CD9-210ENST00000543916 S1PR3Q99500 378 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 SLC25A33Q9BSK2 321 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 GHITMQ9H3K2 345 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 NECAP2Q9NVZ3 263 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 ZNF221Q9UK13 617 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 TENM1Q9UKZ4 2725 aa12.06□□□□□ -0.48
CD9-210ENST00000543916 IGKV1D-13A0A0B4J2D9 117 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 TUSC2O75896 110 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 TPPPO94811 219 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 OR2F2O95006 317 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 CT45A6P0DMU7 189 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 CT45A5P0DMU8 189 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 CT45A7P0DMV0 189 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 IGKV1-13P0DP09 117 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 TMEM11P17152 192 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 TNFSF8P32971 234 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 COMPP49747 757 aaPredicted RBP12.05□□□□□ -0.48
CD9-210ENST00000543916 FOXL1Q12952 345 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 HNF4GQ14541 408 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 AWAT1Q58HT5 328 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
CD9-210ENST00000543916 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms