RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 RBM24Q9BX46 236 aaKnown RBP4.26□□□□□ -1.73
LMO3-229ENST00000543721 GNB1LQ9BYB4 327 aa4.26□□□□□ -1.73
LMO3-229ENST00000543721 ULBP2Q9BZM5 246 aa4.26□□□□□ -1.73
LMO3-229ENST00000543721 METTL7AQ9H8H3 244 aa4.26□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1-27A0A075B6S5 117 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 A0A1W2PQF6 199 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 J3KRW8 73 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 SIRPB1O00241 398 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 MPDU1O75352 247 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 TOX4O94842 621 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 TNFSF4P23510 183 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 LHX2P50458 406 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 MRPS21P82921 87 aaKnown RBP4.25□□□□□ -1.73
LMO3-229ENST00000543721 NOGQ13253 232 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 RSPO1Q2MKA7 263 aaPredicted RBP4.25□□□□□ -1.73
LMO3-229ENST00000543721 ZBTB34Q8NCN2 500 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 CPEB3Q8NE35 698 aaKnown RBP4.25□□□□□ -1.73
LMO3-229ENST00000543721 OR10V1Q8NGI7 309 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 IFI44Q8TCB0 444 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 NABP1Q96AH0 204 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 BORCS7Q96B45 105 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 TUBG2Q9NRH3 451 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 PDE4DIPQ5VU43 2346 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 LRP4O75096 1905 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1D-13A0A0B4J2D9 117 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 IGHV2-70DA0A0C4DH43 119 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 IGHV1-69-2A0A0G2JMI3 117 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 A0A1B0GX78 115 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 A0A1W2PPV4 95 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 FCN1O00602 326 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 CCL25O15444 150 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 EFNA2O43921 213 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 NXPH3O95157 252 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 CLDN1O95832 211 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 SCTP09683 121 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1-13P0DP09 117 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 PRRX1P54821 245 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 KRTDAPP60985 99 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 HTD2P86397 168 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 ARL16Q0P5N6 197 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 MMDQ15546 238 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 PRSS8Q16651 343 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 FBLN7Q53RD9 439 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 DMRTC1Q5HYR2 192 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 FAM162BQ5T6X4 162 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 HAPLN4Q86UW8 402 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 ZNF295-AS1Q8N0V1 137 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 PSMF1Q92530 271 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 DEFB118Q96PH6 123 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 UBE2ZQ9H832 354 aaPredicted RBP4.25□□□□□ -1.73
LMO3-229ENST00000543721 IL23AQ9NPF7 189 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 IGHV2OR16-5A0A0B4J2B6 119 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 hCG_38984A0A1B0GV85 526 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 C5orf63A6NC05 138 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 DNPH1O43598 174 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 NUPR1O60356 82 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 NXPH2O95156 264 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 PSG2P11465 335 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 TFPI2P48307 235 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 RPEL1Q2QD12 228 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 SNAI3Q3KNW1 292 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 ACSM6Q6P461 480 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 MCEMP1Q8IX19 187 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 STPG4Q8N801 248 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 ZNF611Q8N823 705 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 OR2M3Q8NG83 312 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 PIGCQ92535 297 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
LMO3-229ENST00000543721 QTRT1Q9BXR0 403 aaKnown RBP4.25□□□□□ -1.73
LMO3-229ENST00000543721 MTIF3Q9H2K0 278 aaKnown RBP4.25□□□□□ -1.73
LMO3-229ENST00000543721 CHTOPQ9Y3Y2 248 aaKnown RBP4.25□□□□□ -1.73
LMO3-229ENST00000543721 IGHV5-51A0A0C4DH38 117 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 A0A1W2PNR3 127 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 CCDC85CA6NKD9 419 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 C5orf67F2Z3F1 127 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 TRAPPC2LH3BP13 241 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 SYNGR3O43761 229 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 CIDEAO60543 219 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 HYPMO75409 117 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 S1PR2O95136 353 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1D-33P01593 117 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1-33P01594 117 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 TIMP3P35625 211 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 GABRA2P47869 451 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 AMTP48728 403 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 CCL7P80098 99 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 VWC2Q2TAL6 325 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 ZNF324BQ6AW86 544 aaPredicted RBP4.24□□□□□ -1.73
LMO3-229ENST00000543721 C12orf76Q8N812 135 aaPredicted RBP4.24□□□□□ -1.73
LMO3-229ENST00000543721 OR1L6Q8NGR2 347 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 OR51H1Q8NH63 302 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 SMIM12Q96EX1 92 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 KLHDC7BQ96G42 594 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 CCDC74BQ96LY2 380 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 VPS25Q9BRG1 176 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 SF3B5Q9BWJ5 86 aaKnown RBP4.24□□□□□ -1.73
LMO3-229ENST00000543721 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.24□□□□□ -1.73
LMO3-229ENST00000543721 MRPL27Q9P0M9 148 aaKnown RBP4.24□□□□□ -1.73
LMO3-229ENST00000543721 TBL2Q9Y4P3 447 aaKnown RBP4.24□□□□□ -1.73
LMO3-229ENST00000543721 CACNA1GO43497 2377 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms