RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 INPP1P49441 399 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 LUMP51884 338 aaPredicted RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 FXYD4P59646 89 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 UBA52P62987 128 aaKnown RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 DIAPH2-AS1Q14236 149 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 HERPUD1Q15011 391 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 CNPY1Q3B7I2 92 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 SVEP1Q4LDE5 3571 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 ACTBL2Q562R1 376 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 RPL39P5Q59GN2 51 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 LY6G6FQ5SQ64 297 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 LDLRAD2Q5SZI1 272 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 DHRS7BQ6IAN0 325 aaPredicted RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 TMEM17Q86X19 198 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 PRIMA1Q86XR5 153 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 OR8H3Q8N146 312 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 TMEM86BQ8N661 226 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 DRAM1Q8N682 238 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 ZDHHC22Q8N966 263 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 OR52I2Q8NH67 350 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 OR56B4Q8NH76 319 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 GPX8Q8TED1 209 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 RTN4IP1Q8WWV3 396 aaPredicted RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 ABHD1Q96SE0 405 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 PARP12Q9H0J9 701 aaKnown RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 OR2D2Q9H210 308 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 GHITMQ9H3K2 345 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 RAB18Q9NP72 206 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 ESM1Q9NQ30 184 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 VPREB3Q9UKI3 123 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 A3GALT2U3KPV4 340 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 MXRA5Q9NR99 2828 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 NSD1Q96L73 2696 aaPredicted RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 TEP1Q99973 2627 aaKnown RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 FAM181BA6NEQ2 426 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 NCBP2LA6PVI3 153 aaKnown RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 RNF212BA8MTL3 300 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 LY6LH3BQJ8 138 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 H7C2Y5 167 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 M0R1X1 148 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 ITGB1BP1O14713 200 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 LANCL1O43813 399 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 GPR137BO60478 399 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 TUSC2O75896 110 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 IGKV1D-33P01593 117 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 IGKV1-33P01594 117 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 APOA2P02652 100 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 RNASE1P07998 156 aaKnown RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 SNRNP70P08621 437 aaKnown RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 CSF1P09603 554 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 TMEM11P17152 192 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 HRH1P35367 487 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 RFX2P48378 723 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 TAS2R19P59542 299 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 DGCR2P98153 550 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 ZNF816Q0VGE8 651 aaPredicted RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 CBX3Q13185 183 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 HNF4GQ14541 408 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 AANATQ16613 207 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 RNASE10Q5GAN6 216 aaKnown RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 C16orf87Q6PH81 154 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 TMEM219Q86XT9 240 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 H1FOOQ8IZA3 346 aaPredicted RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 OR6Q1Q8NGQ2 317 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 OR6F1Q8NGZ6 308 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 SECTM1Q8WVN6 248 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 TMEM158Q8WZ71 300 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 SNAPC3Q92966 411 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 AJUBAQ96IF1 538 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 AKR1E2Q96JD6 320 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 ZNF2Q9BSG1 426 aaPredicted RBP5.09□□□□□ -1.59
LTBR-212ENST00000543542 CHIAQ9BZP6 476 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 IFI27L2Q9H2X8 130 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 PRDM13Q9H4Q3 707 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 KLK11Q9UBX7 282 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 TCF19Q9Y242 345 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 OR2W1Q9Y3N9 320 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 TLN2Q9Y4G6 2542 aa5.09□□□□□ -1.59
LTBR-212ENST00000543542 ZFHX3Q15911 3703 aa5.09□□□□□ -1.6
LTBR-212ENST00000543542 A0A1W2PPI3 338 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 VGLL3A8MV65 326 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 DISC1C4P0D8 188 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 CLDN34H7C241 214 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 M0QYG6 137 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 CTDSPLO15194 276 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 PEX14O75381 377 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 SLC22A5O76082 557 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 RAB3DO95716 219 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 PPYP01298 95 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 CD3DP04234 171 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 AMY2AP04746 511 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 PGAM2P15259 253 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 NAT1P18440 290 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 AADACP22760 399 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 PTBP1P26599 531 aaKnown RBP eCLIP5.08□□□□□ -1.6
LTBR-212ENST00000543542 CD1BP29016 333 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 S100GP29377 79 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 DYNLT3P51808 116 aa5.08□□□□□ -1.6
LTBR-212ENST00000543542 SSBP1Q04837 148 aaKnown RBP5.08□□□□□ -1.6
LTBR-212ENST00000543542 LSAMPQ13449 338 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms