RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TGIF2LXQ8IUE1 241 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 LYG1Q8N1E2 194 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR56B1Q8NGI3 324 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 AP3S1Q92572 193 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CITED2Q99967 270 aaPredicted RBP7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SLIRPQ9GZT3 109 aaKnown RBP7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 CHMP1AQ9HD42 196 aaPredicted RBP7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 STEAP1Q9UHE8 339 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 JPT1Q9UK76 154 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 A3GALT2U3KPV4 340 aa7.73□□□□□ -1.17
TNFRSF1A-214ENST00000543048 IGHV3-72A0A0B4J1Y9 119 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 TCRBV4S1A1TA0A5B7 111 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SMIM30A4D0T7 59 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 NCBP2LA6PVI3 153 aaKnown RBP7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 FOXI3A8MTJ6 420 aaPredicted RBP7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 LDLRAD4O15165 306 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 LANCL1O43813 399 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MOSP00540 346 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 GHRHP01286 108 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OPN1MWP04001 364 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OPN1MW2P0DN77 364 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OPN1MW3P0DN78 364 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 PPP1CCP36873 323 aaKnown RBP7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 DEFA6Q01524 100 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 HMGN3Q15651 99 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SFXN4Q6P4A7 337 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 IZUMO1Q8IYV9 350 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 Q8N6K4 173 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 C5orf56Q8N8D9 126 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR4F17Q8NGA8 305 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MCFD2Q8NI22 146 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 SETD6Q8TBK2 473 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 ARHGAP5-AS1Q96IT6 56 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 OR4F4Q96R69 305 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 ABHD14AQ9BUJ0 271 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 PECRQ9BY49 303 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 AK3Q9UIJ7 227 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 MGAT4AQ9UM21 535 aa7.72□□□□□ -1.17
TNFRSF1A-214ENST00000543048 A0A075B6Q4 140 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 TMEM272A0A1B0GTI8 110 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 IFITM5A6NNB3 132 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 NOTOA8MTQ0 251 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 ZNF736B4DX44 427 aaPredicted RBP7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 TMEM127O75204 238 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 IGHG2P01859 326 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 OR10A3P58181 314 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 GNMTQ14749 295 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 MOB1BQ7L9L4 216 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 NR2C2APQ86WQ0 139 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 ODF3L1Q8IXM7 274 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 OR2AK2Q8NG84 335 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 OR8H1Q8NGG4 311 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 CHPT1Q8WUD6 406 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 IL1F10Q8WWZ1 152 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 R3HDM4Q96D70 268 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 S1PR3Q99500 378 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 TSC22D3Q99576 134 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 RASL11BQ9BPW5 248 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 NXF2Q9GZY0 626 aaKnown RBP7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 Q9N2K0 584 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 PLSCR3Q9NRY6 295 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 TSSC4Q9Y5U2 329 aaPredicted RBP7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 TGP01266 2768 aa7.71□□□□□ -1.18
TNFRSF1A-214ENST00000543048 PSMB11A5LHX3 300 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 METTL21EPA6NDL7 271 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 SERPINE3A8MV23 424 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 ITGB1BP1O14713 200 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 KCNAB3O43448 404 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 CEACAM6P40199 344 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 PLA2G7Q13093 441 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 LSAMPQ13449 338 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 TCTEX1D4Q5JR98 221 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 PLAC9Q5JTB6 97 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 Q6ZPA2 131 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 LINC00299Q6ZSB3 139 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 SLC35E3Q7Z769 313 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 OR4X2Q8NGF9 303 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 ACOT12Q8WYK0 555 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 CMSS1Q9BQ75 279 aaKnown RBP7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 HDHD3Q9BSH5 251 aaPredicted RBP7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 C6orf62Q9GZU0 229 aaPredicted RBP7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 GHITMQ9H3K2 345 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 LIN7CQ9NUP9 197 aaKnown RBP7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 PIPOXQ9P0Z9 390 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 DAPK2Q9UIK4 370 aa7.7□□□□□ -1.18
TNFRSF1A-214ENST00000543048 A0A1W2PRX2 142 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 LINC01548A6NM66 108 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 TRDCB7Z8K6 153 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 RAB29O14966 203 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 HSPA12AO43301 675 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 RPLP1P05386 114 aaKnown RBP7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 SCTP09683 121 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 CD3GP09693 182 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 RAB6AP20340 208 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 ZBTB25P24278 435 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 OR3A3P47888 321 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 F2RL1P55085 397 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 SLC35B1P78383 322 aa7.69□□□□□ -1.18
TNFRSF1A-214ENST00000543048 MRPS15P82914 257 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms