RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 VEGFBP49765 207 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 TMEM170BQ5T4T1 132 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 TMEM252Q8N6L7 170 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 SLC25A10Q9UBX3 287 aaPredicted RBP12.28□□□□□ -0.44
TRPM1-203ENST00000542188 MYH9P35579 1960 aaKnown RBP12.28□□□□□ -0.44
TRPM1-203ENST00000542188 MARS2Q96GW9 593 aaKnown RBP12.28□□□□□ -0.44
TRPM1-203ENST00000542188 MRPL32Q9BYC8 188 aaKnown RBP12.28□□□□□ -0.44
TRPM1-203ENST00000542188 KLK15Q9H2R5 256 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 PATE4P0C8F1 98 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 TAF15Q92804 592 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRPM1-203ENST00000542188 MS4A5Q9H3V2 200 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 GOLGA4Q13439 2230 aaKnown RBP12.28□□□□□ -0.44
TRPM1-203ENST00000542188 TRAV8-4A0A0B4J246 113 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
TRPM1-203ENST00000542188 COL10A1Q03692 680 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 ISXQ2M1V0 245 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 OR52M1Q8NGK5 317 aa12.28□□□□□ -0.44
TRPM1-203ENST00000542188 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 LOXHD1Q8IVV2 1947 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 IGKV3D-11A0A0A0MRZ8 115 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 LIPT2A6NK58 231 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 H7C1H1 209 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 IGKV3-11P04433 115 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 SRFP11831 508 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 FXYD3Q14802 87 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 FOXC2Q99958 501 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 NALCNQ8IZF0 1738 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 MBNL2Q5VZF2 373 aaKnown RBP12.27□□□□□ -0.44
TRPM1-203ENST00000542188 C5orf30Q96GV9 206 aa12.27□□□□□ -0.44
TRPM1-203ENST00000542188 TRBV20OR9-2A0A075B6H5 130 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 ASAH2BP0C7U1 165 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 ARRDC1-AS1Q9H2J1 176 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 FAM90A26D6RGX4 464 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 C8orf88P0DMB2 117 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 FGF5P12034 268 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 PNLIPP16233 465 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 SSTR5P35346 364 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 ANKRD33Q7Z3H0 272 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 MMD2Q8IY49 270 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 TINAGQ9UJW2 476 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 FTH1P19P0C7X4 201 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 TFPI2P48307 235 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 MSRB3Q8IXL7 192 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 SIGMAR1Q99720 223 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 NPFFR1Q9GZQ6 430 aa12.27□□□□□ -0.45
TRPM1-203ENST00000542188 CDC42EP2O14613 210 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 SLC25A20O43772 301 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 EML2O95834 649 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 CD1AP06126 327 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 FAM106CPP0CH98 169 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 CKS1BP61024 79 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 SMAD4Q13485 552 aaKnown RBP12.26□□□□□ -0.45
TRPM1-203ENST00000542188 RTN4RQ9BZR6 473 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 PKIBQ9C010 78 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 A0A1B0GTL3 188 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 METTL12A8MUP2 240 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 KLK10O43240 276 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 LCN2P80188 198 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 INO80CQ6PI98 192 aaPredicted RBP12.26□□□□□ -0.45
TRPM1-203ENST00000542188 DNAJC4Q9NNZ3 241 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 TMEM50AO95807 157 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 GPX1P07203 203 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 ID4P47928 161 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 CYB5R2Q6BCY4 276 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 Q6ZNB5 142 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 OPN3Q9H1Y3 402 aaPredicted RBP12.26□□□□□ -0.45
TRPM1-203ENST00000542188 CROCCQ5TZA2 2017 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 HOXD4P09016 255 aaPredicted RBP12.26□□□□□ -0.45
TRPM1-203ENST00000542188 NXPH1P58417 271 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 PHLDA1Q8WV24 401 aaPredicted RBP12.26□□□□□ -0.45
TRPM1-203ENST00000542188 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 TMEM222Q9H0R3 208 aa12.26□□□□□ -0.45
TRPM1-203ENST00000542188 H0YL77 283 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 ZNF660Q6AZW8 331 aaPredicted RBP12.25□□□□□ -0.45
TRPM1-203ENST00000542188 ATG4DQ86TL0 474 aaPredicted RBP12.25□□□□□ -0.45
TRPM1-203ENST00000542188 SDHCQ99643 169 aaPredicted RBP12.25□□□□□ -0.45
TRPM1-203ENST00000542188 LPAR2Q9HBW0 351 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 ANKRD12Q6UB98 2062 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 TM4SF4P48230 202 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 HIST1H2BAQ96A08 127 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 SFXN3Q9BWM7 321 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 IGKV3OR2-268A0A0C4DH90 116 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 ARL14EPLP0DKL9 152 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 CNTFRP26992 372 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 MGAT2Q10469 447 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 IRF3Q14653 427 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 SPEM1Q8N4L4 309 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 IGHV3OR15-7A0A075B7D8 119 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 DNASE2BQ8WZ79 361 aa12.25□□□□□ -0.45
TRPM1-203ENST00000542188 SF3B6Q9Y3B4 125 aaKnown RBP12.25□□□□□ -0.45
TRPM1-203ENST00000542188 TRAV21A0A0B4J279 112 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 EAF1Q96JC9 268 aaPredicted RBP12.24□□□□□ -0.45
TRPM1-203ENST00000542188 PPIAL4EA0A075B759 164 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 CGB1A6NKQ9 187 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 PPIAL4DF5H284 164 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 CLDN14O95500 239 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms