RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ABHD14BQ96IU4 210 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 NABP2Q9BQ15 211 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 MRPL20Q9BYC9 149 aaKnown RBP7.72□□□□□ -1.17
YBX3-212ENST00000542002 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.72□□□□□ -1.17
YBX3-212ENST00000542002 RHBDL2Q9NX52 303 aa7.72□□□□□ -1.17
YBX3-212ENST00000542002 TRBV6-7A0A0A0MS04 114 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 TMEM235A6NFC5 223 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 ADARB2-AS1A8MUL3 147 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 SERPINE3A8MV23 424 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 ITGB1BP1O14713 200 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 FABP7O15540 132 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 RGS11O94810 467 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 MOSP00540 346 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 PTHLHP12272 177 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 ZBTB25P24278 435 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 IL3RAP26951 378 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 CNTFRP26992 372 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 VDAC2P45880 294 aaPredicted RBP7.71□□□□□ -1.18
YBX3-212ENST00000542002 LSAMPQ13449 338 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 TIMM50Q3ZCQ8 353 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 HACD4Q5VWC8 232 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 Q8N9W7 124 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 OR4A4PQ8NGN8 299 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 NUDCD2Q8WVJ2 157 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 TOLLIPQ9H0E2 274 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 VCX3AQ9NNX9 186 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 RDH8Q9NYR8 311 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 SPATA2Q9UM82 520 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 MOB4Q9Y3A3 225 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 VWFP04275 2813 aa7.71□□□□□ -1.18
YBX3-212ENST00000542002 TRAV18A0A075B6X5 111 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 NCBP2LA6PVI3 153 aaKnown RBP7.7□□□□□ -1.18
YBX3-212ENST00000542002 RAB29O14966 203 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 BET1O15155 118 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 TSPAN15O95858 294 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 ALDH3B2P48448 385 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 ARFRP1Q13795 201 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 CTF1Q16619 201 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 SRSF7Q16629 238 aaKnown RBP eCLIP7.7□□□□□ -1.18
YBX3-212ENST00000542002 C9orf152Q5JTZ5 239 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 GLDNQ6ZMI3 551 aaPredicted RBP7.7□□□□□ -1.18
YBX3-212ENST00000542002 Q6ZS49 121 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 DRAXINQ8NBI3 349 aaPredicted RBP7.7□□□□□ -1.18
YBX3-212ENST00000542002 OR2T10Q8NGZ9 312 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 SLC25A46Q96AG3 418 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 C5orf30Q96GV9 206 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 AKR1E2Q96JD6 320 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 NOL4LQ96MY1 436 aaPredicted RBP7.7□□□□□ -1.18
YBX3-212ENST00000542002 S1PR3Q99500 378 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 CABLES2Q9BTV7 478 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 LINC00527Q9UJ94 153 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 MGAT4AQ9UM21 535 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 ETV7Q9Y603 341 aa7.7□□□□□ -1.18
YBX3-212ENST00000542002 M0QZK8 103 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 HSPA12AO43301 675 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 FGF16O43320 207 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 GSTP1P09211 210 aaKnown RBP7.69□□□□□ -1.18
YBX3-212ENST00000542002 OR8U9P0C7N5 309 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 DTYMKP23919 212 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 TALDO1P37837 337 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 SERPINB10P48595 397 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 SCAND1P57086 179 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 GPR107Q5VW38 600 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 ANKRD13BQ86YJ7 626 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 FAM71E2Q8N5Q1 922 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 GVQW1Q8N7I0 195 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 ZNF383Q8NA42 475 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 OR5AU1Q8NGC0 362 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 OR8U1Q8NH10 309 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
YBX3-212ENST00000542002 HSPB9Q9BQS6 159 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 ABCG5Q9H222 651 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 PIPOXQ9P0Z9 390 aa7.69□□□□□ -1.18
YBX3-212ENST00000542002 H0YJW9 148 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 TXNL1O43396 289 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 IGHG2P01859 326 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 FCER2P06734 321 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 ACTBP60709 375 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 MRPS15P82914 257 aaKnown RBP7.68□□□□□ -1.18
YBX3-212ENST00000542002 CD83Q01151 205 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 KIR2DS1Q14954 304 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 PNLIPRP3Q17RR3 467 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 CENPVQ7Z7K6 275 aaPredicted RBP7.68□□□□□ -1.18
YBX3-212ENST00000542002 ZNF329Q86UD4 541 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 H1FOOQ8IZA3 346 aaPredicted RBP7.68□□□□□ -1.18
YBX3-212ENST00000542002 OR5AN1Q8NGI8 311 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 OR10J5Q8NHC4 309 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 FAM110DQ8TAY7 271 aaPredicted RBP7.68□□□□□ -1.18
YBX3-212ENST00000542002 MRPS26Q9BYN8 205 aaKnown RBP7.68□□□□□ -1.18
YBX3-212ENST00000542002 AUNIPQ9H7T9 357 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 ZNF107Q9UII5 783 aaPredicted RBP7.68□□□□□ -1.18
YBX3-212ENST00000542002 NBEAL1Q6ZS30 2694 aa7.68□□□□□ -1.18
YBX3-212ENST00000542002 J3QRK9 145 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 M0QZ24 198 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 FCN1O00602 326 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 XRCC3O43542 346 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 TMEM127O75204 238 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 FBXO24O75426 580 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms