RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CEBPZOS	A8MTT3	80 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C3orf80	F5H4A9	247 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MPPED1	O15442	326 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR4A8	P0C604	315 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	B4GALT1	P15291	398 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CCL1	P22362	96 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PRR30	Q53SZ7	412 aa	Predicted RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FAM90A2P	Q658T7	463 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TBC1D26	Q86UD7	250 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CXorf67	Q86X51	503 aa	Predicted RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C2orf88	Q9BSF0	95 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MS4A5	Q9H3V2	200 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SIRT7	Q9NRC8	400 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CBLN4	Q9NTU7	201 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DUSP13	Q9UII6	198 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ESPL1	Q14674	2120 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IGKV1-12	A0A0C4DH73	117 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ETV2	O00321	342 aa	Predicted RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR7C1	O76099	320 aa	Predicted RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IGKV1D-12	P01611	117 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TNFRSF1A	P19438	455 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	BTF3	P20290	206 aa	Known RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FGF7	P21781	194 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CEACAM8	P31997	349 aa	Predicted RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ECI1	P42126	302 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ARL6IP1	Q15041	203 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF66	Q6ZN08	573 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SSX7	Q7RTT5	188 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SLC35E3	Q7Z769	313 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NEU1	Q99519	415 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RAB9B	Q9NP90	201 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PLSCR4	Q9NRQ2	329 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RPRM	Q9NS64	109 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SLC7A10	Q9NS82	523 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ST3GAL6	Q9Y274	331 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SVIL	O95425	2214 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LOC102723971	A0A1B0GUV8	181 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TRDC	B7Z8K6	153 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		J3QW42	95 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		M0R135	149 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PITX3	O75364	302 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PPY	P01298	95 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	COX5B	P10606	129 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ELL	P55199	621 aa	Predicted RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TLE4	Q04727	773 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	JOSD1	Q15040	202 aa	Predicted RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CNN3	Q15417	329 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RNF138	Q8WVD3	245 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF799	Q96GE5	643 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DIRC2	Q96SL1	478 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ELOVL1	Q9BW60	279 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SRXN1	Q9BYN0	137 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MRPL37	Q9BZE1	423 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM38B	Q9NVV0	291 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PITPNC1	Q9UKF7	332 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A1B0GU03	582 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		K7EM74	188 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CD33	P20138	364 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GZMH	P20718	246 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF133	P52736	654 aa	Predicted RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NUTF2	P61970	127 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TESK1	Q15569	626 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RNFT1	Q5M7Z0	435 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF787	Q6DD87	383 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C20orf204	Q6ZNR8	217 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SELENOH	Q8IZQ5	122 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GAPT	Q8N292	157 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR10A7	Q8NGE5	316 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR1K1	Q8NGR3	316 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR1F12	Q8NHA8	337 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RPUSD4	Q96CM3	377 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF385A	Q96PM9	386 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	UBTD1	Q9HAC8	227 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF286A	Q9HBT8	521 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LYRM2	Q9NU23	88 aa	Predicted RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CPAMD8	Q8IZJ3	1885 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A1B0GUS0	222 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A8MXE2	369 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IAPP	P10997	89 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF25	P17030	456 aa	Predicted RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SCGB2A2	Q13296	93 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PMS2P11	Q13670	270 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RTL6	Q6ICC9	239 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF818P	Q6ZRF7	136 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C16orf82	Q7Z2V1	217 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MRPL41	Q8IXM3	137 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LRTM2	Q8N967	370 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR13D1	Q8NGV5	346 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR1P1	Q8NH06	330 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MOB3A	Q96BX8	217 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	BORCS8	Q96FH0	119 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM68	Q96MH6	324 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PCGF1	Q9BSM1	259 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NDUFAF3	Q9BU61	184 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SNHG12	Q9BXW3	62 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SMDT1	Q9H4I9	107 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF835	Q9Y2P0	537 aa		4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DIDO1	Q9BTC0	2240 aa	Known RBP	4.81	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CELSR3	Q9NYQ7	3312 aa		4.81	□□□□□ -1.64

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