RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ZNF273Q14593 569 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 MORN2Q502X0 79 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 ZNF841Q6ZN19 808 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 ZBTB34Q8NCN2 500 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 OR8B3Q8NGG8 313 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 OR52M1Q8NGK5 317 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 GRPEL2Q8TAA5 225 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 EDARADDQ8WWZ3 215 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 NEIL1Q96FI4 390 aaPredicted RBP11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 OR8B2Q96RD0 313 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 CCL19Q99731 98 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 GFOD1Q9NXC2 390 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 IDI2-AS1Q9NZ38 188 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 PIPOXQ9P0Z9 390 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 GNG12Q9UBI6 72 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 VPS13CQ709C8 3753 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 NDUFS7O75251 213 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 OR8U9P0C7N5 309 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 CD99P14209 185 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 GPR6P46095 362 aaPredicted RBP11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 TMEM187Q14656 261 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 TMEM200BQ69YZ2 307 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 FAM53AQ6NSI3 398 aaPredicted RBP11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 TBC1D26Q86UD7 250 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 OR8U1Q8NH10 309 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 H1FXQ92522 213 aaKnown RBP11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 RAB18Q9NP72 206 aa11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
CYB561A3-216ENST00000540755 C3orf85A0A1B0GTC6 90 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 F5H0A9 414 aaPredicted RBP11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 OMGP23515 440 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 H2BFSP57053 126 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 LTC4SQ16873 150 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 KRTAP21-3Q3LHN1 58 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 LRTM2Q8N967 370 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 MBD6Q96DN6 1003 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 OR2D2Q9H210 308 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 KCNS2Q9ULS6 477 aa11.73□□□□□ -0.53
CYB561A3-216ENST00000540755 PHF1O43189 567 aaPredicted RBP11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 SIX6O95475 246 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 SRPXP78539 464 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 DCAF12L2Q5VW00 463 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 HEPN1Q6WQI6 88 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 LIAT1Q6ZQX7 453 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 C9orf62Q8N4C0 152 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 DRAM1Q8N682 238 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 C8orf46Q8TAG6 207 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 GLYATL2Q8WU03 294 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 AGMATQ9BSE5 352 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 COMMD9Q9P000 198 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 RPUSD1Q9UJJ7 312 aaKnown RBP11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 HSPB11Q9Y547 144 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
CYB561A3-216ENST00000540755 USF3Q68DE3 2245 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 H0Y980 276 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 F2RP25116 425 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 RAB7AP51149 207 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 SP6Q3SY56 376 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 Q3ZCU0 254 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 WDR25Q64LD2 544 aaPredicted RBP11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 TMEM65Q6PI78 240 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 ZNF767PQ75MW2 155 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 LGI3Q8N145 548 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 RAB39BQ96DA2 213 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 TP53RKQ96S44 253 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 TMEM222Q9H0R3 208 aa11.71□□□□□ -0.53
CYB561A3-216ENST00000540755 TLN2Q9Y4G6 2542 aa11.71□□□□□ -0.54
CYB561A3-216ENST00000540755 DNHD1Q96M86 4753 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 RNF212BA8MTL3 300 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 CCSO14618 274 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 ST8SIA5O15466 376 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 TNFSF12O43508 249 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 MMP23AO75900 390 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 CCL3L1P16619 93 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 HOXB4P17483 251 aaPredicted RBP11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 UCP1P25874 307 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 DLX6P56179 175 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 IFITM2Q01629 132 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 PRAMEF5Q5TYX0 476 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 LAMTOR1Q6IAA8 161 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 GSG1LQ6UXU4 331 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 ZNF439Q8NDP4 499 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 TMEM56Q96MV1 263 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 ABHD14AQ9BUJ0 271 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 NMES1Q9C002 83 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 RNF150Q9ULK6 438 aa11.7□□□□□ -0.54
CYB561A3-216ENST00000540755 PSG11Q9UQ72 335 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms