RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 PPP5D1E7EU14 171 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 INHBBP09529 407 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 PSG2P11465 335 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 EBLN2Q6P2I7 272 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 HSD17B13Q7Z5P4 300 aaPredicted RBP12.16□□□□□ -0.46
COLCA1-204ENST00000540738 OR4X2Q8NGF9 303 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 RXFP4Q8TDU9 374 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 LURAP1Q96LR2 239 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 METTL26Q96S19 204 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 LPAR5Q9H1C0 372 aa12.16□□□□□ -0.46
COLCA1-204ENST00000540738 TCF20Q9UGU0 1960 aaKnown RBP12.16□□□□□ -0.46
COLCA1-204ENST00000540738 IGHV3OR16-10A0A075B7F0 116 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 TBX6O95947 436 aaPredicted RBP12.15□□□□□ -0.46
COLCA1-204ENST00000540738 OR4X1Q8NH49 305 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 AQP3Q92482 292 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 ABHD14BQ96IU4 210 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 HDHD3Q9BSH5 251 aaPredicted RBP12.15□□□□□ -0.46
COLCA1-204ENST00000540738 NAGKQ9UJ70 344 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 VSIG4Q9Y279 399 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 hCG_38984A0A1B0GV85 526 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 RFLNBQ8N5W9 214 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 OR10G4Q8NGN3 311 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 WNT9BO14905 357 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 KLF9Q13886 244 aaPredicted RBP12.15□□□□□ -0.46
COLCA1-204ENST00000540738 ACP7Q6ZNF0 438 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 ZNRF4Q8WWF5 429 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 IGKV3D-15A0A087WSY6 115 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 F5H697 171 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 APELAP0DMC3 54 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 HLA-GP17693 338 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 PPOXP50336 477 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 NDUFA6P56556 154 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 PSG7Q13046 419 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 C10orf113Q5VZT2 155 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 WFDC3Q8IUB2 231 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 CTDSP1Q9GZU7 261 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 U3KQ87 197 aa12.15□□□□□ -0.46
COLCA1-204ENST00000540738 MAP1LC3B2A6NCE7 125 aa12.15□□□□□ -0.47
COLCA1-204ENST00000540738 ATP5G2Q06055 141 aa12.15□□□□□ -0.47
COLCA1-204ENST00000540738 MAP1LC3BQ9GZQ8 125 aa12.15□□□□□ -0.47
COLCA1-204ENST00000540738 CHD5Q8TDI0 1954 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 POC1AQ8NBT0 407 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 SLC24A4Q8NFF2 622 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 LINC00052Q96N35 136 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 TRAV30A0A087WSZ9 112 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 C1QTNF9BB2RNN3 333 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 MPC2O95563 127 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 C1QTNF9P0C862 333 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 EFNA4P52798 201 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 VAX1Q5SQQ9 334 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 ELOVL1Q9BW60 279 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 TRBV5-7A0A0A0MS05 114 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 TEPPQ6URK8 271 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 GAB2Q9UQC2 676 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 ANKRD36A6QL64 1941 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 SPCS3P61009 180 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 MIDNQ504T8 468 aa12.14□□□□□ -0.47
COLCA1-204ENST00000540738 RTTNQ86VV8 2226 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 H0Y980 276 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 SLC25A17O43808 307 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 ADRB1P08588 477 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 M6PRP20645 277 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 GLIPR1P48060 266 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 MFAP4P55083 255 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 ZNF154Q13106 437 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 LINC00114Q6XXX2 140 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 PPP1R2P9O14990 202 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 MBPP02686 304 aaPredicted RBP12.13□□□□□ -0.47
COLCA1-204ENST00000540738 PDGFAP04085 211 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 SELENOTP62341 195 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 REPIN1Q9BWE0 567 aaKnown RBP12.13□□□□□ -0.47
COLCA1-204ENST00000540738 TLNRD1Q9H1K6 362 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 CCDC88CQ9P219 2028 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 BMPR1BO00238 502 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 HIST1H1BP16401 226 aaKnown RBP12.13□□□□□ -0.47
COLCA1-204ENST00000540738 UBE2V2Q15819 145 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 C16orf82Q7Z2V1 217 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 CABLES2Q9BTV7 478 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 ZDHHC11Q9H8X9 412 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 CKAP5Q14008 2032 aa12.13□□□□□ -0.47
COLCA1-204ENST00000540738 NPIPB11E5RHQ5 1161 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 SULT1A1P50225 295 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 EFNB2P52799 333 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 ERVFC1-1P60608 527 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 CADM3Q8N126 398 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 OR5M8Q8NGP6 311 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 LILRB4Q8NHJ6 448 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 Q96M66 194 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 ZNF426Q9BUY5 554 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 MMP24Q9Y5R2 645 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 OR2A4O95047 310 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 CFDP00746 253 aaPredicted RBP12.12□□□□□ -0.47
COLCA1-204ENST00000540738 IGHG3P01860 377 aa12.12□□□□□ -0.47
COLCA1-204ENST00000540738 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms