RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 UBBP0CG47 229 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 LYL1P12980 280 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 MAPK3P27361 379 aaPredicted RBP9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 MC5RP33032 325 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 PITPNAQ00169 270 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 FAM131AQ6UXB0 335 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 OVCH2Q7RTZ1 564 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 SETD9Q8NE22 299 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 ARPC1AQ92747 370 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 NEDD4LQ96PU5 975 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 OR4C12Q96R67 309 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 CITED4Q96RK1 184 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 SLC23A1Q9UHI7 598 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 EFCAB10A6NFE3 127 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 A8MZ25 164 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 ST8SIA5O15466 376 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 BAG2O95816 211 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 CT45A6P0DMU7 189 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 CT45A5P0DMU8 189 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 CT45A7P0DMV0 189 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 EGR2P11161 476 aaPredicted RBP9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 CD40LGP29965 261 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 ST3GAL4Q11206 333 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 PLGLAQ15195 96 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 LRRC36Q1X8D7 754 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 AKIRIN2Q53H80 203 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 TTC23Q5W5X9 447 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 C5orf24Q7Z6I8 188 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 SVOPQ8N4V2 548 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 OR5AN1Q8NGI8 311 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 GGHQ92820 318 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 FAM46BQ96A09 425 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 CYYR1Q96J86 154 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 RHOVQ96L33 236 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 SULT4A1Q9BR01 284 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 TM2D3Q9BRN9 247 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 FBXL15Q9H469 300 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 SLA2Q9H6Q3 261 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 PALMDQ9NP74 551 aa9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 CNOT2Q9NZN8 540 aaKnown RBP9.25□□□□□ -0.93
CBX3P4-202ENST00000540428 LCE6AA0A183 80 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 TRIM64CA6NLI5 447 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 H0YJW9 148 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 NAPSAO96009 420 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 GSTP1P09211 210 aaKnown RBP9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 CELP19835 753 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 RPS27AP62979 156 aaKnown RBP9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 ACTBL2Q562R1 376 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 ZNF880Q6PDB4 577 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 UNQ5815/PRO19632Q6UWF5 114 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 ZNF562Q6V9R5 426 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 MOB1BQ7L9L4 216 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 PPP1R27Q86WC6 154 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 IL1F10Q8WWZ1 152 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 TM2D1Q9BX74 207 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 RIMS4Q9H426 269 aaPredicted RBP9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 C8orf4Q9NR00 106 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 WASHC3Q9Y3C0 194 aa9.24□□□□□ -0.93
CBX3P4-202ENST00000540428 RYR2Q92736 4967 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 PNMA8CA0A1B0GUJ8 204 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 FCN1O00602 326 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 MYL12BO14950 172 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 LDLRAD4O15165 306 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 HSPA12AO43301 675 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 SPDEFO95238 335 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 IGLV1-51P01701 117 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 TFAP2AP05549 437 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 WNT4P56705 351 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 TPPP2P59282 170 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 RPL39P5Q59GN2 51 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 C1orf100Q5SVJ3 147 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 GLT8D1Q68CQ7 371 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 C6orf201Q7Z4U5 140 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 KCNG3Q8TAE7 436 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 ABHD5Q8WTS1 349 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 CASTOR1Q8WTX7 329 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 EDARADDQ8WWZ3 215 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 AGMATQ9BSE5 352 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 FAAP24Q9BTP7 215 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 TMEM59Q9BXS4 323 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 C19orf73Q9NVV2 129 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 STUB1Q9UNE7 303 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 A3GALT2U3KPV4 340 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 DNAH7Q8WXX0 4024 aa9.23□□□□□ -0.93
CBX3P4-202ENST00000540428 TENM2Q9NT68 2774 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 DYNC2H1Q8NCM8 4307 aaKnown RBP9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 TRBV6-6A0A0A6YYG2 114 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 H3BUA1 57 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 H7C2Y5 167 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 SLC22A1O15245 554 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 IGHV3-11P01762 117 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 IGHV4-30-4P0DP06 118 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 SRSF7Q16629 238 aaKnown RBP eCLIP9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 MOGAT2Q3SYC2 334 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 OR10K2Q6IF99 312 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 GLDNQ6ZMI3 551 aaPredicted RBP9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 SGPP2Q8IWX5 399 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 Q8N1Y9 231 aa9.22□□□□□ -0.93
CBX3P4-202ENST00000540428 MS4A15Q8N5U1 240 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms