RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 DTX3Q8N9I9 347 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 OR2AK2Q8NG84 335 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 RTN4IP1Q8WWV3 396 aaPredicted RBP5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 TMEM158Q8WZ71 300 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 CFHR4Q92496 578 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 SNAPC3Q92966 411 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 RPEQ96AT9 228 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 DNHD1Q96M86 4753 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 MDFIQ99750 246 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 AGMATQ9BSE5 352 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 DCUN1D5Q9BTE7 237 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 C19orf24Q9BVV8 132 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 NXF2Q9GZY0 626 aaKnown RBP5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 TOLLIPQ9H0E2 274 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 PGPEP1Q9NXJ5 209 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 EXTL2Q9UBQ6 330 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 ANXA10Q9UJ72 324 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 ADAM30Q9UKF2 790 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 ANAPC10Q9UM13 185 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 TCF19Q9Y242 345 aa5.61□□□□□ -1.51
LPCAT3-209ENST00000540060 IGHV1-3A0A0C4DH29 117 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 DPPA5A6NC42 116 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 MEIS3P1A6NDR6 274 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 A6NDX4 124 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 FAM25AB3EWG3 89 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 FAM25CB3EWG5 89 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 FAM25GB3EWG6 89 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 CTDSP2O14595 271 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 TIMM23O14925 209 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 RGS5O15539 181 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 TXNL1O43396 289 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 LANCL1O43813 399 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 CHST1O43916 411 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 VAMP1P23763 118 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 CEACAM6P40199 344 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 CBX5P45973 191 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 REG1BP48304 166 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 RAB13P51153 203 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 LY6EQ16553 131 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 FAM71F2Q6NXP2 309 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 CNIH2Q6PI25 160 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 CCBE1Q6UXH8 406 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 ZNF833PQ6ZTB9 187 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 HOGA1Q86XE5 327 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 SNX29P2Q8IUI4 249 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 H1FOOQ8IZA3 346 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 OR8H3Q8N146 312 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 LYG1Q8N1E2 194 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 BEST4Q8NFU0 473 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 OR56B4Q8NH76 319 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 OR10J5Q8NHC4 309 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 GPX8Q8TED1 209 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 EDARADDQ8WWZ3 215 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 ST6GALNAC5Q9BVH7 336 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 C6orf62Q9GZU0 229 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 C11orf54Q9H0W9 315 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 ABCB10Q9NRK6 738 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 RDH8Q9NYR8 311 aa5.6□□□□□ -1.51
LPCAT3-209ENST00000540060 FAM90A9PA6NNJ1 464 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 RNF212BA8MTL3 300 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 RAB29O14966 203 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 TPPPO94811 219 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 GAPDHP04406 335 aaKnown RBP5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 LPLP06858 475 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 SNRNP70P08621 437 aaKnown RBP5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 HKR1P10072 659 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 NAT1P18440 290 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 CD24P25063 80 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 BRS3P32247 399 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 PRSS3P35030 304 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 OR3A3P47888 321 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 ARPC4P59998 168 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 ACTG1P63261 375 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 RELBQ01201 579 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 RPL39P5Q59GN2 51 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 TMEM219Q86XT9 240 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 TGIF2LXQ8IUE1 241 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 DRAM1Q8N682 238 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 MCFD2Q8NI22 146 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 TAF15Q92804 592 aaKnown RBP eCLIP5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 ABHD14BQ96IU4 210 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 ZNF251Q9BRH9 671 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 GINS4Q9BRT9 223 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 MRPL20Q9BYC9 149 aaKnown RBP5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 OR2D2Q9H210 308 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 SCPEP1Q9HB40 452 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 IFT46Q9NQC8 304 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 C1RLQ9NZP8 487 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 NDUFA13Q9P0J0 144 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 PIPOXQ9P0Z9 390 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 PITPNC1Q9UKF7 332 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 MRPS7Q9Y2R9 242 aaKnown RBP5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 A3GALT2U3KPV4 340 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 VWFP04275 2813 aa5.59□□□□□ -1.51
LPCAT3-209ENST00000540060 TMEM89A2RUT3 159 aa5.58□□□□□ -1.52
LPCAT3-209ENST00000540060 SULT1C2O00338 296 aa5.58□□□□□ -1.52
LPCAT3-209ENST00000540060 PROP1O75360 226 aa5.58□□□□□ -1.52
LPCAT3-209ENST00000540060 TUSC2O75896 110 aa5.58□□□□□ -1.52
LPCAT3-209ENST00000540060 NDUFA7O95182 113 aa5.58□□□□□ -1.52
LPCAT3-209ENST00000540060 IGKV1D-33P01593 117 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms