RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TMEM54Q969K7 222 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 RHOVQ96L33 236 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 SLC2A8Q9NY64 477 aa8.59□□□□□ -1.03
TRAF1-202ENST00000540010 DUXBA0A1W2PPF3 345 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF891A8MT65 544 aaPredicted RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 IL2RAP01589 272 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 SP1P08047 785 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 MDH2P40926 338 aaKnown RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 RND3P61587 244 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 HIKESHIQ53FT3 197 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 LY6G6FQ5SQ64 297 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 TMEM251Q8N6I4 163 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 DTD1Q8TEA8 209 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 GPR35Q9HC97 309 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 CLN8Q9UBY8 286 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 EXPH5Q8NEV8 1989 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 RBM11P57052 281 aaKnown RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 C10orf128Q5T292 105 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 GGNQ86UU5 652 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 KDF1Q8NAX2 398 aaPredicted RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 VPS25Q9BRG1 176 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 TMEM147Q9BVK8 224 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 MUC3AQ02505 3323 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 OR5B21A6NL26 309 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 PMELP40967 661 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 SUB1P53999 127 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 MRGPRGQ86SM5 289 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 Q8IYB0 196 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 ZIC4Q8N9L1 334 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF703Q9H7S9 590 aaPredicted RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 TREM2Q9NZC2 230 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 COL6A6A6NMZ7 2263 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 PLCE1Q9P212 2302 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 LRRC30A6NM36 301 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 NKX2-8O15522 239 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 PTBP3O95758 552 aaKnown RBP8.58□□□□□ -1.04
TRAF1-202ENST00000540010 PGA5P0DJD9 388 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 CRISP2P16562 243 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 F2RP25116 425 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 RTL8BQ17RB0 113 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 KHDC3LQ587J8 217 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF766Q5HY98 468 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 STUMQ69YW2 141 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 SARAFQ96BY9 339 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 C10orf35Q96D05 121 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 Q9N2K0 584 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 OR1A1Q9P1Q5 309 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 PAM16Q9Y3D7 125 aa8.58□□□□□ -1.04
TRAF1-202ENST00000540010 ABCA4P78363 2273 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 TGIF2-C20orf24A0A0A6YYL0 155 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 A0A0U1RQV5 110 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 SRSF10O75494 262 aaKnown RBP8.57□□□□□ -1.04
TRAF1-202ENST00000540010 NPBWR2P48146 333 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 HNRNPA3P51991 378 aaKnown RBP8.57□□□□□ -1.04
TRAF1-202ENST00000540010 KCNMB1Q16558 191 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 HIST3H3Q16695 136 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 DPPA3Q6W0C5 159 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 SLC35E3Q7Z769 313 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 PROCRQ9UNN8 238 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 CRYM-AS1A6NIL9 109 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 NKX6-3A6NJ46 265 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 RPL36A-HNRNPH2H7BZ11 118 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 ACAA1P09110 424 aaPredicted RBP8.57□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF83P51522 516 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 FAM3BP58499 235 aaPredicted RBP8.57□□□□□ -1.04
TRAF1-202ENST00000540010 SLC35B1P78383 322 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 FOXO1Q12778 655 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 MOB1BQ7L9L4 216 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 WFDC8Q8IUA0 241 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 LILRB1Q8NHL6 650 aaPredicted RBP8.57□□□□□ -1.04
TRAF1-202ENST00000540010 LRRC29Q8WV35 223 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 WFIKKN1Q96NZ8 548 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 MPC1Q9Y5U8 109 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 COX7A2P2O60397 106 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 ZNF253O75346 499 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 CD82P27701 267 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 AESQ08117 197 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 PITPNC1Q9UKF7 332 aa8.57□□□□□ -1.04
TRAF1-202ENST00000540010 ELOA3CA0A087WX78 387 aaPredicted RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 SERTM2A0A1B0GWG4 89 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 TCAPO15273 167 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 BCL2P10415 239 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 GNG4P50150 75 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 DEFB109BQ30KR1 87 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 OR10G8Q8NGN5 311 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 TMEM222Q9H0R3 208 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 MRPS18CQ9Y3D5 142 aaKnown RBP8.56□□□□□ -1.04
TRAF1-202ENST00000540010 CBY3A6NI87 242 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 DBX1A6NMT0 343 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 SLC31A2O15432 143 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 POC1AQ8NBT0 407 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 OR5D13Q8NGL4 314 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 POM121L2Q96KW2 1035 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 SIRT7Q9NRC8 400 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 FKBP11Q9NYL4 201 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 TRGV10A0A0A0MS01 117 aa8.56□□□□□ -1.04
TRAF1-202ENST00000540010 LOC102723971A0A1B0GUV8 181 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms