RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 OR5AK2Q8NH90 309 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 ABHD5Q8WTS1 349 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 TSEN15Q8WW01 171 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 DDB2Q92466 427 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 S100A13Q99584 98 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 JAM3Q9BX67 310 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 FBXL15Q9H469 300 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 AMBNQ9NP70 447 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 OR2S2Q9NQN1 319 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 FKBP14Q9NWM8 211 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 PAK1IP1Q9NWT1 392 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 SHISA3A0PJX4 238 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 MCRIP1C9JLW8 97 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 RRHO14718 337 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 RGS10O43665 173 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 ZNF780AO75290 641 aaPredicted RBP8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 TRGV3P03979 118 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 CDK1P06493 297 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 RCC1P18754 421 aaPredicted RBP8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 SERPINA2P20848 420 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 TRAT1Q6PIZ9 186 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 ZNF833PQ6ZTB9 187 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 PRSS48Q7RTY5 328 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 GAPTQ8N292 157 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 MRPL48Q96GC5 212 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 MYCBPQ99417 103 aaPredicted RBP8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 PDCD1LG2Q9BQ51 273 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 ABHD14AQ9BUJ0 271 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 SPACA1Q9HBV2 294 aa8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 MRPS18AQ9NVS2 196 aaKnown RBP8.84□□□□□ -0.99
CLSTN3-209ENST00000539982 FADS2O95864 444 aaKnown RBP8.83□□□□□ -1
CLSTN3-209ENST00000539982 TFAP2AP05549 437 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 GTF2F2P13984 249 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 ZNF93P35789 620 aaPredicted RBP8.83□□□□□ -1
CLSTN3-209ENST00000539982 OR3A3P47888 321 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 ST3GAL4Q11206 333 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 PLGLAQ15195 96 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 MOGAT2Q3SYC2 334 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 ZNF562Q6V9R5 426 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 LHFPL3Q86UP9 236 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 SPARTQ8N0X7 666 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 SYS1Q8N2H4 156 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 Q8N402 240 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 SVOPQ8N4V2 548 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 OR52L2PQ8NGH6 319 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 TMEM106AQ96A25 262 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 MRPS24Q96EL2 167 aaKnown RBP8.83□□□□□ -1
CLSTN3-209ENST00000539982 FAM103A1Q9BTL3 118 aaKnown RBP8.83□□□□□ -1
CLSTN3-209ENST00000539982 CCDC90BQ9GZT6 254 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 ISG20L2Q9H9L3 353 aaKnown RBP8.83□□□□□ -1
CLSTN3-209ENST00000539982 TAF9BQ9HBM6 251 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 VCX3AQ9NNX9 186 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 TMEM138Q9NPI0 162 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 ETAA1Q9NY74 926 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 TAS2R4Q9NYW5 299 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 SIGLEC8Q9NYZ4 499 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 RCC2Q9P258 522 aaKnown RBP8.83□□□□□ -1
CLSTN3-209ENST00000539982 GAB2Q9UQC2 676 aa8.83□□□□□ -1
CLSTN3-209ENST00000539982 EXOGQ9Y2C4 368 aaKnown RBP8.83□□□□□ -1
CLSTN3-209ENST00000539982 A0A0G2JLM5 398 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 C13orf42A0A1B0GVH6 325 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 ANKRD34BA5PLL1 514 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 IZUMO1RA6ND01 250 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 E9PI62 339 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 YPEL1O60688 119 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 CNIH1O95406 144 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 BRI3O95415 125 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 CSN3P07498 182 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 PPP1CCP36873 323 aaKnown RBP8.82□□□□□ -1
CLSTN3-209ENST00000539982 RPL5P46777 297 aaKnown RBP8.82□□□□□ -1
CLSTN3-209ENST00000539982 SOX2P48431 317 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
CLSTN3-209ENST00000539982 SYNJ2BPP57105 145 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 HTD2P86397 168 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 MRPL28Q13084 256 aaKnown RBP8.82□□□□□ -1
CLSTN3-209ENST00000539982 GNMTQ14749 295 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 TATDN3Q17R31 274 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 LY6G6FQ5SQ64 297 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 OR52I1Q8NGK6 324 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 LGALS12Q96DT0 336 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 TMEM80Q96HE8 168 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 YPEL2Q96QA6 119 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 ALG8Q9BVK2 526 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 PLEKHA3Q9HB20 300 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 FGF20Q9NP95 211 aaPredicted RBP8.82□□□□□ -1
CLSTN3-209ENST00000539982 BATF3Q9NR55 127 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 KCNIP1Q9NZI2 227 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 JPT1Q9UK76 154 aa8.82□□□□□ -1
CLSTN3-209ENST00000539982 SAA2-SAA4A0A096LPE2 208 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 A0A1W2PP11 408 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 H3BUA1 57 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 CA11O75493 328 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 TPPPO94811 219 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 CD2P06729 351 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 SAA2P0DJI9 122 aaPredicted RBP8.81□□□□□ -1
CLSTN3-209ENST00000539982 FSTP19883 344 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 DCKP27707 260 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 MC5RP33032 325 aa8.81□□□□□ -1
CLSTN3-209ENST00000539982 ALDH3B2P48448 385 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms