RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 HIVEP3Q5T1R4 2406 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 IGKV1D-42A0A075B6H8 117 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 SMIM9A6NGZ8 99 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 C17orf51A8MQB3 221 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 H3BQ15 152 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 DUS4LO95620 317 aaKnown RBP10.8□□□□□ -0.68
DDX55-206ENST00000539934 LMO1P25800 156 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 FHL1Q13642 323 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 ZNF343Q6P1L6 599 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 INO80EQ8NBZ0 244 aaPredicted RBP10.8□□□□□ -0.68
DDX55-206ENST00000539934 PERPQ96FX8 193 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 SDSLQ96GA7 329 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 RCHY1Q96PM5 261 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 HIST1H2AAQ96QV6 131 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 HCAR1Q9BXC0 346 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 RAB9BQ9NP90 201 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 COMMD9Q9P000 198 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 THYN1Q9P016 225 aa10.8□□□□□ -0.68
DDX55-206ENST00000539934 BOKQ9UMX3 212 aaPredicted RBP10.8□□□□□ -0.68
DDX55-206ENST00000539934 TRAV38-1A0A0B4J264 116 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 A0A1B0GUS0 222 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 A0A1B0GW64 132 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 ZC3H12DA2A288 527 aaKnown RBP10.79□□□□□ -0.68
DDX55-206ENST00000539934 KIAA1324LA8MWY0 1029 aaPredicted RBP10.79□□□□□ -0.68
DDX55-206ENST00000539934 LIMS3P0CW19 117 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 LIMS4P0CW20 117 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 FUT3P21217 361 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 LPAR6P43657 344 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 P2RX1P51575 399 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 UBE2NP61088 152 aaKnown RBP10.79□□□□□ -0.68
DDX55-206ENST00000539934 EFNB3Q15768 340 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 IAH1Q2TAA2 248 aaPredicted RBP10.79□□□□□ -0.68
DDX55-206ENST00000539934 SFRP4Q6FHJ7 346 aaPredicted RBP10.79□□□□□ -0.68
DDX55-206ENST00000539934 OR52E2Q8NGJ4 325 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 VN1R17PQ8TDU5 208 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 SLAMF6Q96DU3 332 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 SRD5A3Q9H8P0 318 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 PAM16Q9Y3D7 125 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 IER3IP1Q9Y5U9 82 aa10.79□□□□□ -0.68
DDX55-206ENST00000539934 B4DEV8 164 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 ZFAND5O76080 213 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 AGFG2O95081 481 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 PSG2P11465 335 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 SULT1A2P50226 295 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 FBXW4P57775 412 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 ZNF74Q16587 644 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 DEFB109BQ30KR1 87 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 FAM69BQ5VUD6 431 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 ZNF787Q6DD87 383 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 SAXO1Q8IYX7 474 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 OR4K13Q8NH42 304 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 BLNKQ8WV28 456 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 ZNF524Q96C55 264 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 MOB1AQ9H8S9 216 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 PATZ1Q9HBE1 687 aaKnown RBP10.78□□□□□ -0.68
DDX55-206ENST00000539934 ANKRD10Q9NXR5 420 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 GPR132Q9UNW8 380 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 A0A087WX48 190 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 A0A0G2JMM0 328 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 TMEM272A0A1B0GTI8 110 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 A0A1W2PPB8 328 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 PRSS37A4D1T9 235 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 KIR3DP1A8MWS1 328 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 TAX1BP3O14907 124 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 ZNF354AO60765 605 aaPredicted RBP10.78□□□□□ -0.68
DDX55-206ENST00000539934 IFNA1P01562 189 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 IGHA1P01876 353 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 CLDN15P56746 228 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 Q6ZN92 141 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 APOBEC3DQ96AK3 386 aaPredicted RBP10.78□□□□□ -0.68
DDX55-206ENST00000539934 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 RBM24Q9BX46 236 aaKnown RBP10.78□□□□□ -0.68
DDX55-206ENST00000539934 OR11A1Q9GZK7 315 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 TXNIPQ9H3M7 391 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 PPDPFQ9H3Y8 114 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 PRSS50Q9UI38 385 aa10.78□□□□□ -0.68
DDX55-206ENST00000539934 PTRH2Q9Y3E5 179 aaKnown RBP10.78□□□□□ -0.68
DDX55-206ENST00000539934 IGHV2-26A0A0B4J1V2 119 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 ODAMA1E959 279 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 PLPP2O43688 288 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 GYPBP06028 91 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 SERPINE2P07093 398 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 HIST1H1CP16403 213 aaKnown RBP10.77□□□□□ -0.68
DDX55-206ENST00000539934 COL10A1Q03692 680 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 ZNF791Q3KP31 576 aaPredicted RBP10.77□□□□□ -0.68
DDX55-206ENST00000539934 WIPI1Q5MNZ9 446 aaPredicted RBP10.77□□□□□ -0.68
DDX55-206ENST00000539934 AMMECR1LQ6DCA0 310 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 UFSP1Q6NVU6 142 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 UNQ6126/PRO20091Q6UXV3 157 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 FA2HQ7L5A8 372 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 OR2AE1Q8NHA4 323 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 NEU4Q8WWR8 484 aaPredicted RBP10.77□□□□□ -0.68
DDX55-206ENST00000539934 RNF183Q96D59 192 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 OR10C1Q96KK4 312 aa10.77□□□□□ -0.68
DDX55-206ENST00000539934 OTOGQ6ZRI0 2925 aa10.77□□□□□ -0.69
DDX55-206ENST00000539934 A0A1B0GTI1 187 aa10.77□□□□□ -0.69
DDX55-206ENST00000539934 MRPL3P09001 348 aaKnown RBP10.77□□□□□ -0.69
DDX55-206ENST00000539934 GNLYP22749 145 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms