RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 C6orf201Q7Z4U5 140 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 CEACAM19Q7Z692 300 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 SVOPQ8N4V2 548 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 UFD1Q92890 307 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 PLGRKTQ9HBL7 147 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 WASHC3Q9Y3C0 194 aa11.93□□□□□ -0.5
UBE3B-211ENST00000539843 A0A1W2PN81 502 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 NDUFA3O95167 84 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 GNAO1P09471 354 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 ARSBP15848 533 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 ZBTB25P24278 435 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 CHRNA7P36544 502 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 MRPS15P82914 257 aaKnown RBP11.92□□□□□ -0.5
UBE3B-211ENST00000539843 SPHARQ15513 63 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 TRAM1Q15629 374 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 OGFRL1Q5TC84 451 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-211ENST00000539843 OR10K2Q6IF99 312 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 FAM131AQ6UXB0 335 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 MYOZ3Q8TDC0 251 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 FBLIM1Q8WUP2 373 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 IFI27L2Q9H2X8 130 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 ISYNA1Q9NPH2 558 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 FOXA2Q9Y261 457 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-211ENST00000539843 SMAD5-AS1Q9Y6J3 95 aa11.92□□□□□ -0.5
UBE3B-211ENST00000539843 PTGES3LE9PB15 166 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 LINC01619G3V211 115 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 I3L521 148 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 ITGB1BP1O14713 200 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 RRHO14718 337 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 OVOL1O14753 267 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 SAP30O75446 220 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 ARL6IP5O75915 188 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 CNTFRP26992 372 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 RNF5Q99942 180 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 GNB4Q9HAV0 340 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 C12orf4Q9NQ89 552 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 FKBP14Q9NWM8 211 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 ZNF221Q9UK13 617 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 TPRKBQ9Y3C4 175 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
UBE3B-211ENST00000539843 A3GALT2U3KPV4 340 aa11.91□□□□□ -0.5
UBE3B-211ENST00000539843 CASQ2O14958 399 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-211ENST00000539843 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
UBE3B-211ENST00000539843 SLC22A1O15245 554 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 NAPSAO96009 420 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 APOA2P02652 100 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 CPEP16870 476 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 PSMA1P25786 263 aaKnown RBP11.9□□□□□ -0.5
UBE3B-211ENST00000539843 HLA-DRB3P79483 266 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 LRRTM1Q86UE6 522 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 MINDY2Q8NBR6 621 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 OR6Q1Q8NGQ2 317 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 FLYWCH2Q96CP2 140 aaKnown RBP11.9□□□□□ -0.5
UBE3B-211ENST00000539843 TSNAXQ99598 290 aaKnown RBP11.9□□□□□ -0.5
UBE3B-211ENST00000539843 KLK15Q9H2R5 256 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 FBXL15Q9H469 300 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 SCOCQ9UIL1 159 aa11.9□□□□□ -0.5
UBE3B-211ENST00000539843 TRBV6-6A0A0A6YYG2 114 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 TMEM14DPA8MWL7 114 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 LGALS1P09382 135 aaKnown RBP11.89□□□□□ -0.51
UBE3B-211ENST00000539843 OR8U9P0C7N5 309 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 HSMCR30P0CW71 290 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 CEACAM6P40199 344 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 GNB1P62873 340 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 CX3CL1P78423 397 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 PITPNAQ00169 270 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 CBX3Q13185 183 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 INSL4Q14641 139 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 RAB11BQ15907 218 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 ACTBL2Q562R1 376 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 RPL39P5Q59GN2 51 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 ZNF880Q6PDB4 577 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 UNQ5815/PRO19632Q6UWF5 114 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 RITA1Q96K30 269 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 NICN1Q9BSH3 213 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
UBE3B-211ENST00000539843 H0YJW9 148 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 SPDEFO95238 335 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 UCHL1P09936 223 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 CT45A6P0DMU7 189 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 CT45A5P0DMU8 189 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 CT45A7P0DMV0 189 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 PSMD7P51665 324 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 CRIP2P52943 208 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-211ENST00000539843 UNC119Q13432 240 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 LIPKQ5VXJ0 399 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 LAIR2Q6ISS4 152 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 GLDNQ6ZMI3 551 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-211ENST00000539843 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 OR56B1Q8NGI3 324 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 OR5AN1Q8NGI8 311 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 ABHD14BQ96IU4 210 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 OR4C12Q96R67 309 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 CMSS1Q9BQ75 279 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms