RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 KIR2DS1Q14954 304 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 C5orf64Q2M2E5 130 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 PRSS48Q7RTY5 328 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 C4orf3Q8WVX3 66 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 RITA1Q96K30 269 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 CHCHD6Q9BRQ6 235 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 HDHD3Q9BSH5 251 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-206ENST00000539320 VCX3BQ9H321 246 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 PARP11Q9NR21 331 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 KIAA1456Q9P272 454 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 SLC23A1Q9UHI7 598 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 RAB29O14966 203 aa17.36■□□□□ 0.37
SCARB1-206ENST00000539320 ATP6V0E1O15342 81 aa17.36■□□□□ 0.37
SCARB1-206ENST00000539320 CALRP27797 417 aaKnown RBP17.36■□□□□ 0.37
SCARB1-206ENST00000539320 FAM131AQ6UXB0 335 aa17.36■□□□□ 0.37
SCARB1-206ENST00000539320 FAM89BQ8N5H3 189 aa17.36■□□□□ 0.37
SCARB1-206ENST00000539320 PARP12Q9H0J9 701 aaKnown RBP17.36■□□□□ 0.37
SCARB1-206ENST00000539320 OR51J1Q9H342 316 aa17.36■□□□□ 0.37
SCARB1-206ENST00000539320 C12orf4Q9NQ89 552 aa17.36■□□□□ 0.37
SCARB1-206ENST00000539320 MGAT4AQ9UM21 535 aa17.36■□□□□ 0.37
SCARB1-206ENST00000539320 IGHV7-81A0A0B4J1V7 117 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 FOXI3A8MTJ6 420 aaPredicted RBP17.35■□□□□ 0.37
SCARB1-206ENST00000539320 ITGB1BP1O14713 200 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 NDUFA3O95167 84 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 MAP2K4P45985 399 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 RPL39P5Q59GN2 51 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 NPBQ8NG41 125 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 OR5M8Q8NGP6 311 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 MYOZ3Q8TDC0 251 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 MGLLQ99685 303 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 HSF4Q9ULV5 492 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 WSB1Q9Y6I7 421 aa17.35■□□□□ 0.37
SCARB1-206ENST00000539320 OR5H14A6NHG9 310 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 HSPA13P48723 471 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 CLDN12P56749 244 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 FABP5Q01469 135 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 TBCEQ15813 527 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-206ENST00000539320 DEFB121Q5J5C9 76 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 IZUMO2Q6UXV1 221 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 EDARADDQ8WWZ3 215 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 OR1A1Q9P1Q5 309 aa17.34■□□□□ 0.37
SCARB1-206ENST00000539320 ZMAT5Q9UDW3 170 aaKnown RBP17.34■□□□□ 0.37
SCARB1-206ENST00000539320 G3V318 75 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 HSPA12AO43301 675 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 PPIFP30405 207 aaKnown RBP17.33■□□□□ 0.36
SCARB1-206ENST00000539320 RANBP1P43487 201 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 VEGFCP49767 419 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 FHL3Q13643 280 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 ZNF367Q7RTV3 350 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 FAM3DQ96BQ1 224 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 ARHGAP5-AS1Q96IT6 56 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 ABHD14BQ96IU4 210 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 Q9N2K0 584 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 ACOT13Q9NPJ3 140 aa17.33■□□□□ 0.36
SCARB1-206ENST00000539320 TRAV41A0A0B4J266 112 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 H0YJW9 148 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 CT45A6P0DMU7 189 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 CT45A5P0DMU8 189 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 CT45A7P0DMV0 189 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 LUMP51884 338 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-206ENST00000539320 TMEM50BP56557 158 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 DGCR2P98153 550 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 NDPQ00604 133 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 DCTN2Q13561 401 aaKnown RBP17.32■□□□□ 0.36
SCARB1-206ENST00000539320 LIN54Q6MZP7 749 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 GLDNQ6ZMI3 551 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-206ENST00000539320 OR56B1Q8NGI3 324 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 CMSS1Q9BQ75 279 aaKnown RBP17.32■□□□□ 0.36
SCARB1-206ENST00000539320 PECRQ9BY49 303 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 C11orf54Q9H0W9 315 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-206ENST00000539320 GHITMQ9H3K2 345 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 BLOC1S6Q9UL45 172 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 V9GY05 133 aa17.32■□□□□ 0.36
SCARB1-206ENST00000539320 ATP6V1G2O95670 118 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 ZBTB25P24278 435 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 CEACAM6P40199 344 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 C9orf66Q5T8R8 295 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 TMEM65Q6PI78 240 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 CNBD2Q96M20 576 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 AGMATQ9BSE5 352 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 KLK15Q9H2R5 256 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 WASHC3Q9Y3C0 194 aa17.31■□□□□ 0.36
SCARB1-206ENST00000539320 RRHO14718 337 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 LDLRAD4O15165 306 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 RBBP9O75884 186 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 IGLV1-40P01703 118 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 SCTP09683 121 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 PSMD7P51665 324 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 PLGLAQ15195 96 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 ECSCRQ19T08 205 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 HES5Q5TA89 166 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 OR5AN1Q8NGI8 311 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 UBE2E2Q96LR5 201 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 FBXL15Q9H469 300 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 GNB4Q9HAV0 340 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 VSIG4Q9Y279 399 aa17.3■□□□□ 0.36
SCARB1-206ENST00000539320 TMEM272A0A1B0GTI8 110 aa17.29■□□□□ 0.36
SCARB1-206ENST00000539320 SEC14L6B5MCN3 397 aa17.29■□□□□ 0.36
SCARB1-206ENST00000539320 H7C2Y5 167 aa17.29■□□□□ 0.36
SCARB1-206ENST00000539320 DENRO43583 198 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms