RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TEX38Q6PEX7 206 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 SPARTQ8N0X7 666 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 PTX4Q96A99 478 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 PHF21AQ96BD5 680 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 RCC1LQ96I51 464 aaKnown RBP9.11□□□□□ -0.95
RTN3-209ENST00000538995 CMSS1Q9BQ75 279 aaKnown RBP9.11□□□□□ -0.95
RTN3-209ENST00000538995 CHCHD6Q9BRQ6 235 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 HDHD3Q9BSH5 251 aaPredicted RBP9.11□□□□□ -0.95
RTN3-209ENST00000538995 PLXNB1O43157 2135 aa9.11□□□□□ -0.95
RTN3-209ENST00000538995 SHISA3A0PJX4 238 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 OR5H14A6NHG9 310 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 ST8SIA5O15466 376 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 HSPA12AO43301 675 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 HLA-DRB1P01911 266 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 OR5H8P0DN80 308 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 GADD45AP24522 165 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 PSMB9P28065 219 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 FGF9P31371 208 aaPredicted RBP9.1□□□□□ -0.95
RTN3-209ENST00000538995 OR3A3P47888 321 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 SERPINB10P48595 397 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 F2RL1P55085 397 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 OR10A3P58181 314 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 ACTBP60709 375 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 FOXE3Q13461 319 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 PNLIPRP3Q17RR3 467 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 OXLD1Q5BKU9 147 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 C22orf42Q6IC83 251 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 ZNF773Q6PK81 442 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 C5orf24Q7Z6I8 188 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 NPBQ8NG41 125 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 RAB3CQ96E17 227 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 HSPB9Q9BQS6 159 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 ZNF251Q9BRH9 671 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 AGMATQ9BSE5 352 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 GPR61Q9BZJ8 451 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 NECAP2Q9NVZ3 263 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 ZNF107Q9UII5 783 aaPredicted RBP9.1□□□□□ -0.95
RTN3-209ENST00000538995 STUB1Q9UNE7 303 aa9.1□□□□□ -0.95
RTN3-209ENST00000538995 METTL21EPA6NDL7 271 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 LINC01548A6NM66 108 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 TRDCB7Z8K6 153 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 MFNGO00587 321 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 NBR2O15453 112 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 RBBP9O75884 186 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 NDUFA3O95167 84 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 ELANEP08246 267 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 CD3GP09693 182 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 HIST1H1DP16402 221 aaKnown RBP9.09□□□□□ -0.95
RTN3-209ENST00000538995 VDAC1P21796 283 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 MC5RP33032 325 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 CFHR3Q02985 330 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 KIR2DS1Q14954 304 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 ARL6IP1Q15041 203 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 CXorf66Q5JRM2 361 aaPredicted RBP9.09□□□□□ -0.95
RTN3-209ENST00000538995 ETV3LQ6ZN32 361 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 TPRA1Q86W33 373 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 LINC00482Q8N8I6 264 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 OR4A4PQ8NGN8 299 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 OR10R2Q8NGX6 335 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 CABLES2Q9BTV7 478 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 CENPOQ9BU64 300 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 TOLLIPQ9H0E2 274 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 OR1A1Q9P1Q5 309 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 KIAA1456Q9P272 454 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 KCNK7Q9Y2U2 307 aa9.09□□□□□ -0.95
RTN3-209ENST00000538995 NOTOA8MTQ0 251 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 NUDT19A8MXV4 375 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 RAB27BO00194 218 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 FABP7O15540 132 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 IGHG4P01861 327 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 FCGR3AP08637 254 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 SCTP09683 121 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 CT45A6P0DMU7 189 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 CT45A5P0DMU8 189 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 CT45A7P0DMV0 189 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 CEACAM6P40199 344 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 MYCNOSP40205 109 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 THBS3P49746 956 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 PLA2G7Q13093 441 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 SRSF7Q16629 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
RTN3-209ENST00000538995 C5orf64Q2M2E5 130 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 RPL39P5Q59GN2 51 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 NR2C2APQ86WQ0 139 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 ZNF695Q8IW36 515 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.08□□□□□ -0.96
RTN3-209ENST00000538995 KLHL30-AS1Q8NEE0 82 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 OR5AN1Q8NGI8 311 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 RNF5Q99942 180 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 PARP12Q9H0J9 701 aaKnown RBP9.08□□□□□ -0.96
RTN3-209ENST00000538995 C11orf54Q9H0W9 315 aaPredicted RBP9.08□□□□□ -0.96
RTN3-209ENST00000538995 TXNL4BQ9NX01 149 aaKnown RBP9.08□□□□□ -0.96
RTN3-209ENST00000538995 SSR3Q9UNL2 185 aa9.08□□□□□ -0.96
RTN3-209ENST00000538995 IGKV1-6A0A0C4DH72 117 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 H0YJW9 148 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 SCGNO76038 276 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 SLC2A2P11168 524 aaPredicted RBP9.07□□□□□ -0.96
RTN3-209ENST00000538995 IGLL1P15814 213 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms