RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CTF1Q16619 201 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 PNLIPRP3Q17RR3 467 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 ANKRD13BQ86YJ7 626 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 LYG1Q8N1E2 194 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 FAM71E2Q8N5Q1 922 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 OR2T10Q8NGZ9 312 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 ATG5Q9H1Y0 275 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 DCSTAMPQ9H295 470 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 CHMP1AQ9HD42 196 aaPredicted RBP10.87□□□□□ -0.67
CD9-208ENST00000538834 PIPOXQ9P0Z9 390 aa10.87□□□□□ -0.67
CD9-208ENST00000538834 IGHV3-72A0A0B4J1Y9 119 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 RAB29O14966 203 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 FABP7O15540 132 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 MOSP00540 346 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 CT45A6P0DMU7 189 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 CT45A5P0DMU8 189 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 CT45A7P0DMV0 189 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 TMEM11P17152 192 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 CEACAM6P40199 344 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 OR3A3P47888 321 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 SERPINB10P48595 397 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 CD83Q01151 205 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 TMEM95Q3KNT9 176 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 ABCA11PQ4W5N1 156 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 IGSF11Q5DX21 431 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 MOB3BQ86TA1 216 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 OR2AK2Q8NG84 335 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 OR8H1Q8NGG4 311 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 OR5AN1Q8NGI8 311 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 IL1F10Q8WWZ1 152 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 SLC25A46Q96AG3 418 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 ZNF230Q9UIE0 474 aaPredicted RBP10.86□□□□□ -0.67
CD9-208ENST00000538834 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
CD9-208ENST00000538834 ST8SIA5O15466 376 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 GABARAPO95166 117 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 NCS1P62166 190 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 PITPNAQ00169 270 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 KIR2DS1Q14954 304 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 IDNKQ5T6J7 187 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 SETD6Q8TBK2 473 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 EDARADDQ8WWZ3 215 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 KCTD12Q96CX2 325 aaKnown RBP10.85□□□□□ -0.67
CD9-208ENST00000538834 RBMXL1Q96E39 390 aaKnown RBP10.85□□□□□ -0.67
CD9-208ENST00000538834 RITA1Q96K30 269 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 MRPL20Q9BYC9 149 aaKnown RBP10.85□□□□□ -0.67
CD9-208ENST00000538834 LIN7CQ9NUP9 197 aaKnown RBP10.85□□□□□ -0.67
CD9-208ENST00000538834 RDH8Q9NYR8 311 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 ZNF580Q9UK33 172 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 NOTCH3Q9UM47 2321 aa10.85□□□□□ -0.67
CD9-208ENST00000538834 SH2D7A6NKC9 451 aaPredicted RBP10.84□□□□□ -0.67
CD9-208ENST00000538834 NDUFA3O95167 84 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 LPLP06858 475 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 VDAC2P45880 294 aaPredicted RBP10.84□□□□□ -0.67
CD9-208ENST00000538834 F2RL1P55085 397 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 LSM3P62310 102 aaKnown RBP10.84□□□□□ -0.67
CD9-208ENST00000538834 H1FOOQ8IZA3 346 aaPredicted RBP10.84□□□□□ -0.67
CD9-208ENST00000538834 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.84□□□□□ -0.67
CD9-208ENST00000538834 NPBQ8NG41 125 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 C5orf30Q96GV9 206 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 ABHD14BQ96IU4 210 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 CMTM3Q96MX0 182 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 S1PR3Q99500 378 aa10.84□□□□□ -0.67
CD9-208ENST00000538834 MRPS26Q9BYN8 205 aaKnown RBP10.84□□□□□ -0.67
CD9-208ENST00000538834 NAA50Q9GZZ1 169 aaKnown RBP10.84□□□□□ -0.67
CD9-208ENST00000538834 TMEM235A6NFC5 223 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 XRCC3O43542 346 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 CD28P10747 220 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 VBP1P61758 197 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 HES1Q14469 280 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 HNF4GQ14541 408 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 RPL39P5Q59GN2 51 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 TREML4Q6UXN2 200 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 MAFIPQ8WZ33 124 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 AUNIPQ9H7T9 357 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 ANAPC10Q9UM13 185 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 DNAH3Q8TD57 4116 aa10.83□□□□□ -0.68
CD9-208ENST00000538834 A0A075B6Q4 140 aa10.82□□□□□ -0.68
CD9-208ENST00000538834 H0YJW9 148 aa10.82□□□□□ -0.68
CD9-208ENST00000538834 M0QZ24 198 aa10.82□□□□□ -0.68
CD9-208ENST00000538834 VSIG10L2P0DP72 767 aa10.82□□□□□ -0.68
CD9-208ENST00000538834 ARFRP1Q13795 201 aa10.82□□□□□ -0.68
CD9-208ENST00000538834 NUDCD2Q8WVJ2 157 aa10.82□□□□□ -0.68
CD9-208ENST00000538834 RNF5Q99942 180 aa10.82□□□□□ -0.68
CD9-208ENST00000538834 MEGF8Q7Z7M0 2845 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 TRAV18A0A075B6X5 111 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 OR5H14A6NHG9 310 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 FBXO24O75426 580 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 TUSC2O75896 110 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 TSPAN15O95858 294 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 CTXN2P0C2S0 81 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 MC5RP33032 325 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 ACTBP60709 375 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 MRPS15P82914 257 aaKnown RBP10.81□□□□□ -0.68
CD9-208ENST00000538834 CFHR3Q02985 330 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 UBE2NLQ5JXB2 153 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 HIST2H2BDQ6DRA6 164 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 CNIH2Q6PI25 160 aa10.81□□□□□ -0.68
CD9-208ENST00000538834 C10orf99Q6UWK7 81 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms