RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CASTOR1Q8WTX7 329 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 GALMQ96C23 342 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 FYTTD1Q96QD9 318 aaKnown RBP14.11□□□□□ -0.15
CLN6-202ENST00000538696 TAS2R3Q9NYW6 316 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 CALYQ9NYX4 217 aa14.11□□□□□ -0.15
CLN6-202ENST00000538696 IGHV3-43A0A0B4J1X8 118 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 A0A1W2PPH5 198 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 CRYM-AS1A6NIL9 109 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 ZNF729A6NN14 1252 aaPredicted RBP14.1□□□□□ -0.15
CLN6-202ENST00000538696 C17orf98A8MV24 154 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 SPINT2O43291 252 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 IGHV3-43DP0DP04 118 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 MMP9P14780 707 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 GATA3P23771 443 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 CD34P28906 385 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 CEACAM6P40199 344 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 PIGPP57054 158 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 ERVFRD-1P60508 538 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 SLC9A3R2Q15599 337 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 LTC4SQ16873 150 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 ABCA11PQ4W5N1 156 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 ZNF565Q8N9K5 539 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 UXS1Q8NBZ7 420 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 OR10V1Q8NGI7 309 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 GAL3ST2Q9H3Q3 398 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 CCL28Q9NRJ3 127 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 PRR13Q9NZ81 148 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 OPN4Q9UHM6 478 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 KPTNQ9Y664 436 aa14.1□□□□□ -0.15
CLN6-202ENST00000538696 CELSR1Q9NYQ6 3014 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 KBTBD11-OT1A0A1B0GTJ5 212 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 M0R1W7 72 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 HSD17B6O14756 317 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 LY6G6DO95868 133 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 GZMHP20718 246 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 GNRHRP30968 328 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 PPP1CCP36873 323 aaKnown RBP14.09□□□□□ -0.15
CLN6-202ENST00000538696 PRAMEF5Q5TYX0 476 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 LIN54Q6MZP7 749 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 MITD1Q8WV92 249 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 TBX15Q96SF7 602 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 TOLLIPQ9H0E2 274 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 SLC2A9Q9NRM0 540 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 KCNS2Q9ULS6 477 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 F8P00451 2351 aa14.09□□□□□ -0.15
CLN6-202ENST00000538696 HIVEP1P15822 2718 aa14.08□□□□□ -0.15
CLN6-202ENST00000538696 J3QLI3 93 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 F2RL2O00254 374 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 GPR31O00270 319 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 GOSR2O14653 212 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 MMP23AO75900 390 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 LUMP51884 338 aaPredicted RBP14.08□□□□□ -0.16
CLN6-202ENST00000538696 DLX1P56177 255 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 ZNF818PQ6ZRF7 136 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 VMO1Q7Z5L0 202 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 ZNF486Q96H40 463 aaPredicted RBP14.08□□□□□ -0.16
CLN6-202ENST00000538696 C7orf69Q9H7B7 122 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 NAA60Q9H7X0 242 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 LINC00574Q9H8X3 128 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 OR2S2Q9NQN1 319 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 SIRT7Q9NRC8 400 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 AUP1Q9Y679 476 aa14.08□□□□□ -0.16
CLN6-202ENST00000538696 MAST4O15021 2626 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 TLN2Q9Y4G6 2542 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 TEX13DA0A0J9YY54 714 aaPredicted RBP14.07□□□□□ -0.16
CLN6-202ENST00000538696 TOX4O94842 621 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 SIX6O95475 246 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 DUS4LO95620 317 aaKnown RBP14.07□□□□□ -0.16
CLN6-202ENST00000538696 AVPP01185 164 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 RBP4P02753 201 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 IGHV1-8P0DP01 117 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 OMGP23515 440 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 RND3P61587 244 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 HTD2P86397 168 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 PRB3Q04118 309 aaPredicted RBP14.07□□□□□ -0.16
CLN6-202ENST00000538696 ANKRD55Q3KP44 614 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 LPCAT3Q6P1A2 487 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 HEPN1Q6WQI6 88 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 SGPP2Q8IWX5 399 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 TCTE3Q8IZS6 198 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 CCDC71LQ8N9Z2 235 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 RTN4IP1Q8WWV3 396 aaPredicted RBP14.07□□□□□ -0.16
CLN6-202ENST00000538696 PCGF1Q9BSM1 259 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 ZNF436Q9C0F3 470 aaPredicted RBP14.07□□□□□ -0.16
CLN6-202ENST00000538696 GSX1Q9H4S2 264 aaPredicted RBP14.07□□□□□ -0.16
CLN6-202ENST00000538696 YAE1D1Q9NRH1 226 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 JPT1Q9UK76 154 aa14.07□□□□□ -0.16
CLN6-202ENST00000538696 SMLR1H3BR10 107 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 OR8U9P0C7N5 309 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 ANXA3P12429 323 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 UTF1Q5T230 341 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 C1orf229Q6ZS94 237 aaPredicted RBP14.06□□□□□ -0.16
CLN6-202ENST00000538696 C1orf122Q6ZSJ8 110 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 KCTD9Q7L273 389 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 OR8U1Q8NH10 309 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 TNFRSF14Q92956 283 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 GPHA2Q96T91 129 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 PHB2Q99623 299 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 CHIAQ9BZP6 476 aa14.06□□□□□ -0.16
CLN6-202ENST00000538696 METTL8Q9H825 291 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms