RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 LINC00311Q8N616 119 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 ZNF645Q8N7E2 425 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 C8orf31Q8N9H6 132 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 ZBTB34Q8NCN2 500 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 RAB39BQ96DA2 213 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 GALNT14Q96FL9 552 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 ABHD14BQ96IU4 210 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 SUCNR1Q9BXA5 334 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 MED28Q9H204 178 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 IFI27L2Q9H2X8 130 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 NAA60Q9H7X0 242 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 MMP26Q9NRE1 261 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 RBM7Q9Y580 266 aaKnown RBP9.59□□□□□ -0.87
SPARC-207ENST00000537849 SESN1Q9Y6P5 492 aa9.59□□□□□ -0.87
SPARC-207ENST00000537849 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 TEX13DA0A0J9YY54 714 aaPredicted RBP9.58□□□□□ -0.88
SPARC-207ENST00000537849 A0A1W2PPH5 198 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 M0R1W7 72 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 FOXH1O75593 365 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 SLC22A5O76082 557 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 TRAPPC2P0DI81 140 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 TRAPPC2BP0DI82 140 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 SLC25A16P16260 332 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 VAMP1P23763 118 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 CD34P28906 385 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 LCN2P80188 198 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 TMEM187Q14656 261 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 SLC9A3R2Q15599 337 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 ANKRD55Q3KP44 614 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 SP6Q3SY56 376 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 PRSS57Q6UWY2 283 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 TBC1D26Q86UD7 250 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 KRTAP1-3Q8IUG1 177 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 CMTM1Q8IZ96 169 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 CCDC71LQ8N9Z2 235 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 OR2AK2Q8NG84 335 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 OR11H7Q8NGC8 314 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 GLYATL2Q8WU03 294 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 C1orf159Q96HA4 380 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 ZNF251Q9BRH9 671 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 OR2D2Q9H210 308 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 TMEM133Q9H2Q1 129 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 SDHAF2Q9NX18 166 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 KCNIP3Q9Y2W7 256 aa9.58□□□□□ -0.88
SPARC-207ENST00000537849 MAP1AP78559 2803 aaPredicted RBP9.58□□□□□ -0.88
SPARC-207ENST00000537849 ITPR2Q14571 2701 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 PDZD2O15018 2839 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 DBX1A6NMT0 343 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 J3QR06 171 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 SSNA1O43805 119 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 IFNA2P01563 188 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 HLA-AP01891 365 aaKnown RBP9.57□□□□□ -0.88
SPARC-207ENST00000537849 HLA-GP17693 338 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 CXCL3P19876 107 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 USF1P22415 310 aaPredicted RBP9.57□□□□□ -0.88
SPARC-207ENST00000537849 PRTN3P24158 256 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 F2RP25116 425 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 RAB7AP51149 207 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 DLX1P56177 255 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 RPL30P62888 115 aaKnown RBP9.57□□□□□ -0.88
SPARC-207ENST00000537849 ABHD12Q8N2K0 398 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 KIR3DL3Q8N743 410 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 CASTOR1Q8WTX7 329 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 TP53RKQ96S44 253 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 ABHD14AQ9BUJ0 271 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 PRR13Q9NZ81 148 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 ZNRD1Q9P1U0 126 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 ONECUT1Q9UBC0 465 aa9.57□□□□□ -0.88
SPARC-207ENST00000537849 CR1P17927 2039 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 IGHV2-70DA0A0C4DH43 119 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 C3orf85A0A1B0GTC6 90 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 TNFSF12O43508 249 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 ENSAO43768 121 aaKnown RBP9.56□□□□□ -0.88
SPARC-207ENST00000537849 OR5AC1P0C628 307 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 GPR12P47775 334 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 GNG10P50151 68 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 BRWD1-AS2P59051 145 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 LINC00205P59089 165 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 CD300CQ08708 224 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 HCP5Q6MZN7 132 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 LIN54Q6MZP7 749 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 UXS1Q8NBZ7 420 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.56□□□□□ -0.88
SPARC-207ENST00000537849 OR9G1Q8NH87 305 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 TNFRSF14Q92956 283 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 ST6GALNAC6Q969X2 333 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 MSI2Q96DH6 328 aaKnown RBP9.56□□□□□ -0.88
SPARC-207ENST00000537849 ST6GAL2Q96JF0 529 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 SIRPDQ9H106 197 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 UNKLQ9H9P5 680 aaKnown RBP9.56□□□□□ -0.88
SPARC-207ENST00000537849 KCNS2Q9ULS6 477 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 KPTNQ9Y664 436 aa9.56□□□□□ -0.88
SPARC-207ENST00000537849 hCG_1809904A0A1W2PP81 198 aa9.55□□□□□ -0.88
SPARC-207ENST00000537849 A0A1W2PPE2 198 aa9.55□□□□□ -0.88
SPARC-207ENST00000537849 A0A1W2PR64 198 aa9.55□□□□□ -0.88
SPARC-207ENST00000537849 A0A1W2PRV1 198 aa9.55□□□□□ -0.88
SPARC-207ENST00000537849 RAB29O14966 203 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms