RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 B3GALT5-AS1P59052 145 aa11.95□□□□□ -0.5
LIG1-203ENST00000536218 KRTDAPP60985 99 aa11.95□□□□□ -0.5
LIG1-203ENST00000536218 TEX43Q6ZNM6 134 aa11.95□□□□□ -0.5
LIG1-203ENST00000536218 OR10D3Q8NH80 312 aa11.95□□□□□ -0.5
LIG1-203ENST00000536218 NUDT11Q96G61 164 aa11.95□□□□□ -0.5
LIG1-203ENST00000536218 NUDT16L1Q9BRJ7 211 aaKnown RBP11.95□□□□□ -0.5
LIG1-203ENST00000536218 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
LIG1-203ENST00000536218 MYO7BQ6PIF6 2116 aa11.95□□□□□ -0.5
LIG1-203ENST00000536218 LOC102725191A0A1B0GVB3 256 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 ZNF732B4DXR9 585 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
LIG1-203ENST00000536218 ARL6IP1Q15041 203 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 VAMP3Q15836 100 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 C1orf147Q96MC9 270 aaPredicted RBP11.94□□□□□ -0.5
LIG1-203ENST00000536218 SIGLEC12Q96PQ1 595 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 PLEKHJ1Q9NW61 149 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
LIG1-203ENST00000536218 RNF115Q9Y4L5 304 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 ASPMQ8IZT6 3477 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 FAM166BA8MTA8 275 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 ZNHIT1O43257 154 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 TNFSF15O95150 251 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 CELA3AP09093 270 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 RAC3P60763 192 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 ABHD17BQ5VST6 288 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 H1FOOQ8IZA3 346 aaPredicted RBP11.94□□□□□ -0.5
LIG1-203ENST00000536218 CISD2Q8N5K1 135 aaKnown RBP11.94□□□□□ -0.5
LIG1-203ENST00000536218 GJC3Q8NFK1 279 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 SLC2A9Q9NRM0 540 aa11.94□□□□□ -0.5
LIG1-203ENST00000536218 A0A1W2PN81 502 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 CDS2O95674 445 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 TPPP2P59282 170 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 RPL19P84098 196 aaKnown RBP11.93□□□□□ -0.5
LIG1-203ENST00000536218 HES3Q5TGS1 186 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 DOCK7Q96N67 2140 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 A0A1W2PR80 420 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 GJE1A6NN92 205 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 F6UZH7 168 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 B4GALT1P15291 398 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 AAED1Q7RTV5 226 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 DTX1Q86Y01 620 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 ATP5SQ99766 215 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 IFNA5P01569 189 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 ZNF17P17021 662 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 CLDN15P56746 228 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 ATP1A1-AS1Q5TC04 95 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 TCF23Q7RTU1 214 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 GGNQ86UU5 652 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 OR5AS1Q8N127 324 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 TMEM54Q969K7 222 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 C18orf12Q96KH6 178 aa11.93□□□□□ -0.5
LIG1-203ENST00000536218 RIF1Q5UIP0 2472 aaKnown RBP11.92□□□□□ -0.5
LIG1-203ENST00000536218 FAHP16930 419 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 ECI1P42126 302 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 TAS2R30P59541 319 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 SUMO1P63165 101 aaKnown RBP11.92□□□□□ -0.5
LIG1-203ENST00000536218 SPATA45Q537H7 98 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 KCNIP4Q6PIL6 250 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 NABP1Q96AH0 204 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 WIPI2Q9Y4P8 454 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 IL3RAP26951 378 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
LIG1-203ENST00000536218 CYP2G1PQ6ZSU1 146 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 OR4D5Q8NGN0 318 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 OR2AE1Q8NHA4 323 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 FBLN5Q9UBX5 448 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 FREM1Q5H8C1 2179 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 PCSK5Q92824 1860 aa11.92□□□□□ -0.5
LIG1-203ENST00000536218 HSBP1L1C9JCN9 74 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 ZNF737O75373 536 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 RSPO1Q2MKA7 263 aaPredicted RBP11.91□□□□□ -0.5
LIG1-203ENST00000536218 OR2V1Q8NHB1 315 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 MSI2Q96DH6 328 aaKnown RBP11.91□□□□□ -0.5
LIG1-203ENST00000536218 LYZL4Q96KX0 146 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 GPHA2Q96T91 129 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 LYRM2Q9NU23 88 aaPredicted RBP11.91□□□□□ -0.5
LIG1-203ENST00000536218 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
LIG1-203ENST00000536218 ANXA10Q9UJ72 324 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 M0R135 149 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 PLA2G5P39877 138 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 SP5Q6BEB4 398 aaPredicted RBP11.91□□□□□ -0.5
LIG1-203ENST00000536218 BRICD5Q6PL45 260 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 CORO2AQ92828 525 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 ZNF799Q96GE5 643 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 MOB1AQ9H8S9 216 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 GVINP1Q7Z2Y8 2422 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 YPEL1O60688 119 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 IFNA1P01562 189 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms