RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 MOB3BQ86TA1 216 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 THNSL2Q86YJ6 484 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 OR4F5Q8NH21 305 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 S100A16Q96FQ6 103 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RBM14Q96PK6 669 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 MRPL20Q9BYC9 149 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 ZNF702PQ9H963 129 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RAB18Q9NP72 206 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RDH8Q9NYR8 311 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 PITPNC1Q9UKF7 332 aa9.04□□□□□ -0.96
TNFRSF1A-208ENST00000536194 MEIS3P1A6NDR6 274 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 OR2F2O95006 317 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 DIRAS3O95661 229 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 IGKV1D-33P01593 117 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 IGKV1-33P01594 117 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 FCER2P06734 321 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 KRTAP10-3P60369 221 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 BLCAPP62952 87 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 LSAMPQ13449 338 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 EBI3Q14213 229 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RPL39P5Q59GN2 51 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 TMEM69Q5SWH9 247 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 TGIF2LXQ8IUE1 241 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 H1FOOQ8IZA3 346 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 Q8N2B8 174 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 Q8N6K4 173 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 C5orf30Q96GV9 206 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 CMTM3Q96MX0 182 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 NABP2Q9BQ15 211 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 NPFFR1Q9GZQ6 430 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 MIXL1Q9H2W2 232 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RANBP3Q9H6Z4 567 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 BEX1Q9HBH7 125 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 RNF150Q9ULK6 438 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 DNHD1Q96M86 4753 aa9.03□□□□□ -0.96
TNFRSF1A-208ENST00000536194 CLPSL1A2RUU4 121 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SH2D7A6NKC9 451 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 TXNL1O43396 289 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FAM106CPP0CH98 169 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 TMEM11P17152 192 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CD1BP29016 333 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 PROK1P58294 105 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 LINC00205P59089 165 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SRSF4Q08170 494 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 HNF4GQ14541 408 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 MZT2AQ6P582 158 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 HOGA1Q86XE5 327 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 BEST4Q8NFU0 473 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR10J5Q8NHC4 309 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 WFDC12Q8WWY7 111 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 EDARADDQ8WWZ3 215 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 AP3S1Q92572 193 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SNAPC3Q92966 411 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SLIRPQ9GZT3 109 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CCDC59Q9P031 241 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 PIPOXQ9P0Z9 390 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ANXA10Q9UJ72 324 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ANAPC10Q9UM13 185 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 RNF114Q9Y508 228 aa9.02□□□□□ -0.97
TNFRSF1A-208ENST00000536194 STAB1Q9NY15 2570 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 A0A1B0GUS0 222 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CTDSP2O14595 271 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 RAB29O14966 203 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR8U9P0C7N5 309 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CT45A6P0DMU7 189 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CT45A5P0DMU8 189 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CT45A7P0DMV0 189 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 HES1Q14469 280 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 TMEM95Q3KNT9 176 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FAM71F2Q6NXP2 309 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 CNIH2Q6PI25 160 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 C16orf82Q7Z2V1 217 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 LAX1Q8IWV1 398 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR4C13Q8NGP0 309 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR8U1Q8NH10 309 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 GINS4Q9BRT9 223 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ZNF747Q9BV97 191 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR2D2Q9H210 308 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 PLSCR3Q9NRY6 295 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SERTAD4Q9NUC0 356 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 TENM1Q9UKZ4 2725 aa9.01□□□□□ -0.97
TNFRSF1A-208ENST00000536194 IGKV1D-13A0A0B4J2D9 117 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FAM25AB3EWG3 89 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FAM25CB3EWG5 89 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 FAM25GB3EWG6 89 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 NOL3O60936 208 aaKnown RBP9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 IGKV1-13P0DP09 117 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 NFYAP23511 347 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SOX6P35712 828 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 ABCA11PQ4W5N1 156 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 C11orf88Q6PI97 169 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 SNX29P2Q8IUI4 249 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 C3orf56Q8N813 242 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 C5orf56Q8N8D9 126 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 DRAXINQ8NBI3 349 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 OR2T10Q8NGZ9 312 aa9□□□□□ -0.97
TNFRSF1A-208ENST00000536194 GPX8Q8TED1 209 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms