RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 RPL31P62899 125 aaKnown RBP10.96□□□□□ -0.65
SPG11-203ENST00000535302 CACFD1Q9UGQ2 172 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 KLK13Q9UKR3 277 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 EWSR1Q01844 656 aaKnown RBP eCLIP10.96□□□□□ -0.65
SPG11-203ENST00000535302 CYB5R2Q6BCY4 276 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 OR11H7Q8NGC8 314 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 PRSS27Q9BQR3 290 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 CCL27Q9Y4X3 112 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 A0A0J9YW62 118 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 C5orf67F2Z3F1 127 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 FTH1P19P0C7X4 201 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 VSIG8P0DPA2 414 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 DLX6P56179 175 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 PRSS53Q2L4Q9 553 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 ZNF418Q8TF45 676 aaPredicted RBP10.96□□□□□ -0.66
SPG11-203ENST00000535302 PGPEP1Q9NXJ5 209 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 C9JCJ5 164 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 H3BQ15 152 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 TSPAN13O95857 204 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 CKS2P33552 79 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 MFAP2P55001 183 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 ERVFRD-1P60508 538 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 RSPO4Q2I0M5 234 aaPredicted RBP10.96□□□□□ -0.66
SPG11-203ENST00000535302 FBXW9Q5XUX1 488 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 IGHV1-45A0A0A0MS14 117 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 C2orf83Q53S99 150 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 C1orf185Q5T7R7 199 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 UQCC3Q6UW78 93 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 ERASQ7Z444 233 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 WDFY1Q8IWB7 410 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 DDB2Q92466 427 aa10.96□□□□□ -0.66
SPG11-203ENST00000535302 IGKV1-8A0A0C4DH67 115 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 PROB1E7EW31 1015 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 MPDU1O75352 247 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 GAPDHP04406 335 aaKnown RBP10.95□□□□□ -0.66
SPG11-203ENST00000535302 CLEC2AQ6UVW9 174 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 MCM3APO60318 1980 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 A6NDN8 102 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 NANOS3P60323 173 aaKnown RBP10.95□□□□□ -0.66
SPG11-203ENST00000535302 IZUMO4Q1ZYL8 232 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 KIAA1644Q3SXP7 199 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 SPATA45Q537H7 98 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 ZNF343Q6P1L6 599 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 DCTN5Q9BTE1 182 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 COL4A1P02462 1669 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 K7ERU9 68 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 LSM6P62312 80 aaKnown RBP10.95□□□□□ -0.66
SPG11-203ENST00000535302 ZNF56Q15929 161 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 MBNL2Q5VZF2 373 aaKnown RBP10.95□□□□□ -0.66
SPG11-203ENST00000535302 RNF122Q9H9V4 155 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 SIRT4Q9Y6E7 314 aaPredicted RBP10.95□□□□□ -0.66
SPG11-203ENST00000535302 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 KBTBD11O94819 623 aa10.95□□□□□ -0.66
SPG11-203ENST00000535302 ZNF501Q96CX3 271 aaPredicted RBP10.95□□□□□ -0.66
SPG11-203ENST00000535302 A0A1W2PP11 408 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 PLPPR5Q32ZL2 321 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 WNT5BQ9H1J7 359 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 VAX2Q9UIW0 290 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 C17orf51A8MQB3 221 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 ISLRO14498 428 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 SYNGR1O43759 233 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 PSG4Q00888 419 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 LSMEM1Q8N8F7 131 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 CEACAM18A8MTB9 384 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 PF4P02776 101 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 THY1P04216 161 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 MEOX2P50222 304 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 ANAPC16Q96DE5 110 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 GMPPAQ96IJ6 420 aaPredicted RBP10.94□□□□□ -0.66
SPG11-203ENST00000535302 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 WFDC6Q9BQY6 131 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 TRAF4Q9BUZ4 470 aaPredicted RBP10.94□□□□□ -0.66
SPG11-203ENST00000535302 CA10Q9NS85 328 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 UNC13CQ8NB66 2214 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 SNAI2O43623 268 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 TEPPQ6URK8 271 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 CXorf1O96002 111 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 TMEM78Q5T7P6 136 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 CENPVQ7Z7K6 275 aaPredicted RBP10.94□□□□□ -0.66
SPG11-203ENST00000535302 C1RLQ9NZP8 487 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 NUDT16L1Q9BRJ7 211 aaKnown RBP10.94□□□□□ -0.66
SPG11-203ENST00000535302 TUBA4BQ9H853 241 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 WIPI2Q9Y4P8 454 aa10.94□□□□□ -0.66
SPG11-203ENST00000535302 A0A0B4J293 547 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 OR4C45A6NMZ5 311 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 RPL36A-HNRNPH2H7BZ11 118 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 HOXC8P31273 242 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 PRDX2P32119 198 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 GPR6P46095 362 aaPredicted RBP10.93□□□□□ -0.66
SPG11-203ENST00000535302 LRRC75BQ2VPJ9 315 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 OR2V2Q96R30 315 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 HEXA-AS1Q9H8Q6 139 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 ABLIM2Q6H8Q1 611 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
SPG11-203ENST00000535302 SLC25A33Q9BSK2 321 aa10.93□□□□□ -0.66
SPG11-203ENST00000535302 MIOXQ9UGB7 285 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms