RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KNG1P01042 644 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 PPIAL4FP0DN26 164 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 SERPINA2P20848 420 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 IL13RA2Q14627 380 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 ARL6IP1Q15041 203 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 ZNF146Q15072 292 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 SMIM21Q3B7S5 101 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 FAM89BQ8N5H3 189 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 TMEM230Q96A57 120 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 Q96M66 194 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 PBDC1Q9BVG4 233 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 TMEM59Q9BXS4 323 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 ASH1LQ9NR48 2969 aaKnown RBP10.27□□□□□ -0.77
SCARB1-204ENST00000535005 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 PPIAL4AQ9Y536 164 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 BAHCC1Q9P281 2608 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 ARID1AO14497 2285 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A10PA6NDY2 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A18PA6NE21 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A16PA6NEW6 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 OOEPA6NGQ2 149 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A20PA6NIJ5 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A8PA6NJQ4 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A7PA6NKC0 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A22PA8MWA6 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A12PA8MX19 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A5PA8MXJ8 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A23PA8MXZ1 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 CA11O75493 328 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 TSPAN15O95858 294 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 MPIG6BO95866 241 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 OR8U8P0C7N1 319 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A15PP0C7V4 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 SEC11BP0C7V7 166 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A13PP0C7W8 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A14PP0C7W9 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM90A24PP0C7X0 464 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 RBM11P57052 281 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 RBM39Q14498 530 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 AWAT1Q58HT5 328 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 SPIN3Q5JUX0 258 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 OR52W1Q6IF63 320 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FIP1L1Q6UN15 594 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 Q6ZRG5 221 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 LINC00596Q86U02 117 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 LPAR5Q9H1C0 372 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 BANF2Q9H503 90 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 C5orf66Q9H5L9 145 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 ZMAT3Q9HA38 289 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 ST3GAL6Q9Y274 331 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FLNBO75369 2602 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 BORCS7-ASMTA0A0B4J1R7 106 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 TRAV38-1A0A0B4J264 116 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 C3orf80F5H4A9 247 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 CLN5O75503 358 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 HIST1H1DP16402 221 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 SNCAP37840 140 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 RBMXP38159 391 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 PDLIM4P50479 330 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 DSCR9P59020 149 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 HOXA4Q00056 320 aaPredicted RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 FAM201AQ5SY85 155 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 RPL7L1Q6DKI1 246 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 GVQW1Q8N7I0 195 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 OR5H2Q8NGV7 314 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 RAB1CQ92928 201 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 RAB3CQ96E17 227 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 AKR1E2Q96JD6 320 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 TOLLIPQ9H0E2 274 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 METTL8Q9H825 291 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 UNKLQ9H9P5 680 aaKnown RBP10.26□□□□□ -0.77
SCARB1-204ENST00000535005 OR2S2Q9NQN1 319 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
SCARB1-204ENST00000535005 K7EPK0 472 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 NDUFS8O00217 210 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 TNFRSF13BO14836 293 aaPredicted RBP10.25□□□□□ -0.77
SCARB1-204ENST00000535005 PMP2P02689 132 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 PSG2P11465 335 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 RAB32Q13637 225 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 MPV17LQ2QL34 196 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 PIGYQ3MUY2 71 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 STUMQ69YW2 141 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 BATF2Q8N1L9 274 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 FAM71E2Q8N5Q1 922 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 ZNF525Q8N782 197 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 OR56B1Q8NGI3 324 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 PERPQ96FX8 193 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 TIMD4Q96H15 378 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 IL36RNQ9UBH0 155 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 TMED3Q9Y3Q3 217 aa10.25□□□□□ -0.77
SCARB1-204ENST00000535005 FOXI3A8MTJ6 420 aaPredicted RBP10.24□□□□□ -0.77
SCARB1-204ENST00000535005 PPIHO43447 177 aaKnown RBP10.24□□□□□ -0.77
SCARB1-204ENST00000535005 HOXB5P09067 269 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 HOXA5P20719 270 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 LMO1P25800 156 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 RPL12P30050 165 aaKnown RBP10.24□□□□□ -0.77
SCARB1-204ENST00000535005 MDH2P40926 338 aaKnown RBP10.24□□□□□ -0.77
SCARB1-204ENST00000535005 SUPT4H1P63272 117 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms