RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	OR2F2	O95006	317 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SNRPA	P09012	282 aa	Known RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KRTAP1-4	P0C5Y4	121 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IGKV1-13	P0DP09	117 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ANXA8	P13928	327 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CCNO	P22674	350 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OTX1	P32242	354 aa	Predicted RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	APLNR	P35414	380 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GGT2	P36268	569 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CTRL	P40313	264 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PSG7	Q13046	419 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DAZ2	Q13117	558 aa	Known RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	HES1	Q14469	280 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KIAA0087	Q14695	138 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ZNF79	Q15937	498 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ABCA11P	Q4W5N1	156 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ANXA8L1	Q5VT79	327 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TTC19	Q6DKK2	380 aa	Predicted RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	HCP5	Q6MZN7	132 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TMEM53	Q6P2H8	277 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CNIH2	Q6PI25	160 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	UBE2DNL	Q8IWF7	75 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	COX18	Q8N8Q8	333 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	HSD17B11	Q8NBQ5	300 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C19orf18	Q8NEA5	215 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ZNF563	Q8TA94	476 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	AGR3	Q8TD06	166 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DCAKD	Q8WVC6	231 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CAPSL	Q8WWF8	208 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR2M2	Q96R28	347 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC29A1	Q99808	456 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	BPIFA3	Q9BQP9	254 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C20orf24	Q9BUV8	137 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TAPBPL	Q9BX59	468 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GEMIN7	Q9H840	131 aa	Known RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FGF20	Q9NP95	211 aa	Predicted RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DAZ3	Q9NR90	486 aa	Known RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OPTC	Q9UBM4	332 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ACOT9	Q9Y305	439 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TMEM72	A0PK05	275 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ZNF726	A6NNF4	738 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PPP1R2P9	O14990	202 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FCN3	O75636	299 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FARS2	O95363	451 aa	Known RBP	2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	MOS	P00540	346 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CSTA	P01040	98 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SERPINE1	P05121	402 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IL3	P08700	152 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PGA5	P0DJD9	388 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PRPS1L1	P21108	318 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NAA10	P41227	235 aa	Predicted RBP	2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KIR3DL2	P43630	455 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DYNLT3	P51808	116 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SUB1	P53999	127 aa	Known RBP eCLIP	2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RGS8	P57771	180 aa	Predicted RBP	2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KRTAP10-4	P60372	401 aa	Predicted RBP	2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PPP1CB	P62140	327 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC35B1	P78383	322 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	REG3A	Q06141	175 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	MAB21L1	Q13394	359 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC36A2	Q495M3	483 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC16A14	Q7RTX9	510 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C20orf196	Q8IYI0	205 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OFCC1	Q8IZS5	231 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SPAG16	Q8N0X2	631 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC22A24	Q8N4F4	322 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DRAM1	Q8N682	238 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR11L1	Q8NGX0	322 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FAM81A	Q8TBF8	368 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TMEM106A	Q96A25	262 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PHYHIPL	Q96FC7	376 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RASL11B	Q9BPW5	248 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KCTD14	Q9BQ13	255 aa	Predicted RBP	2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NRIP2	Q9BQI9	281 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PTTG3P	Q9NZH4	202 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ADA2	Q9NZK5	511 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KAAG1	Q9UBP8	84 aa		2.93	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TRAV38-1	A0A0B4J264	116 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IGHV3-64D	A0A0J9YX35	117 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	WRB	O00258	174 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OVOL1	O14753	267 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IFNA5	P01569	189 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	UBTFL6	P0CB48	400 aa	Predicted RBP	2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CTRB1	P17538	263 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GSTM3	P21266	225 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TUBG1	P23258	451 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	STOM	P27105	288 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	POLR2H	P52434	150 aa	Known RBP	2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	BASP1	P80723	227 aa	Known RBP	2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ZNF92	Q03936	586 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C1D	Q13901	141 aa	Known RBP	2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR8B8	Q15620	311 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LCN12	Q6JVE5	192 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	EIF3M	Q7L2H7	374 aa	Known RBP	2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C11orf53	Q8IXP5	236 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DYNAP	Q8N1N2	210 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SUMF2	Q8NBJ7	301 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR11H1	Q8NG94	326 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR10AD1	Q8NGE0	317 aa		2.92	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C4orf3	Q8WVX3	66 aa		2.92	□□□□□ -1.94

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