RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 RUNX1Q01196 453 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ST3GAL3Q11203 375 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 MRPL28Q13084 256 aaKnown RBP2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 GRK1Q15835 563 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 LTC4SQ16873 150 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 C17orf58Q2M2W7 97 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 HLA-DRB5Q30154 266 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CEACAM21Q3KPI0 293 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 COQ5Q5HYK3 327 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 SPANXN2Q5MJ10 180 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ATAD3CQ5T2N8 411 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TRIQKQ629K1 86 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF57Q68EA5 555 aaPredicted RBP2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 XAF1Q6GPH4 301 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 THOC7Q6I9Y2 204 aaKnown RBP2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 OR2T5Q6IEZ7 315 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 SPSB3Q6PJ21 355 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM131AQ6UXB0 335 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 DPY19L2P2Q6ZN68 376 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC16A12Q6ZSM3 486 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 GDPD3Q7L5L3 318 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 KRT74Q7RTS7 529 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 VTCN1Q7Z7D3 282 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 LYG2Q86SG7 212 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TRAPPC6BQ86SZ2 158 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CADM3Q8N126 398 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TEX45Q8NA69 505 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 POC1AQ8NBT0 407 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 OR10G2Q8NGC3 310 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 OR8J3Q8NGG0 315 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 OR2T29Q8NH02 315 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 RFESDQ8TAC1 157 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 MYOZ3Q8TDC0 251 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 PYURFQ96I23 114 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 UBE2E2Q96LR5 201 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 Q96MT0 163 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 MS4A10Q96PG2 267 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 NRIP2Q9BQI9 281 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FNDC11Q9BVV2 318 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 OSBPL10Q9BXB5 764 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TEX12Q9BXU0 123 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TOLLIPQ9H0E2 274 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ABCG5Q9H222 651 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 OR51E2Q9H255 320 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 RNF167Q9H6Y7 350 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 SRD5A3Q9H8P0 318 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 NEK6Q9HC98 313 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 AMBNQ9NP70 447 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ABCB9Q9NP78 766 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CLN6Q9NWW5 311 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 RASL12Q9NYN1 266 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 MTCH1Q9NZJ7 389 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 AP3M1Q9Y2T2 418 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 KLK5Q9Y337 293 aaPredicted RBP2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM32AQ9Y421 112 aaKnown RBP2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 MPC1Q9Y5U8 109 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 KIAA2026Q5HYC2 2103 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 LRP2P98164 4655 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 LRP1Q07954 4544 aaKnown RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 TRBV4-1A0A0J9YWV2 114 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 hADV38S2A0JD32 116 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 NPIPB11E5RHQ5 1161 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 H3BN98 237 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SIRPB1O00241 398 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 DLGAP1O14490 977 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 FGF16O43320 207 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 UPK1BO75841 260 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 RGS11O94810 467 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 GABARAPO95166 117 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 NDUFB4O95168 129 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SOX14O95416 240 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 CSN3P07498 182 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 HTR1AP08908 422 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 RBMY1A1P0DJD3 496 aaKnown RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC2A2P11168 524 aaPredicted RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 VDAC1P21796 283 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PPIBP23284 216 aaKnown RBP2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 S100A1P23297 94 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 GABRR1P24046 479 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 MNDAP41218 407 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 OMPP47874 163 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 OR3A1P47881 315 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 GNG10P50151 68 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 DAPP51397 102 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PRRX1P54821 245 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 CD81P60033 236 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 ZP1P60852 638 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 CDC42P60953 191 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 ERVK11-1P61568 191 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 GNG3P63215 75 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 PITPNAQ00169 270 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 DEFA5Q01523 94 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF45Q02386 682 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SCN1BQ07699 218 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 AESQ08117 197 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 TRAM2Q15035 370 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 NDUFA5Q16718 116 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 SMIM21Q3B7S5 101 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 IFI44LQ53G44 452 aa2.2□□□□□ -2.06
CHMP4A-208ENST00000534106 DDI2Q5TDH0 399 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms