RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 LHFPL4Q7Z7J7 247 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 BCL6BQ8N143 479 aaPredicted RBP12.61□□□□□ -0.39
CTTN-215ENST00000533931 MFSD4AQ8N468 514 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 TOMM40LQ969M1 308 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 TRIM63Q969Q1 353 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 RPEQ96AT9 228 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 SLC6A7Q99884 636 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 THAP7Q9BT49 309 aaPredicted RBP12.61□□□□□ -0.39
CTTN-215ENST00000533931 EHFQ9NZC4 300 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 POMT1Q9Y6A1 747 aa12.61□□□□□ -0.39
CTTN-215ENST00000533931 ANK3Q12955 4377 aaKnown RBP12.6□□□□□ -0.39
CTTN-215ENST00000533931 ANKRD20A5PA0PJZ0 165 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 CLDN34H7C241 214 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 HSD17B6O14756 317 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 SLC31A2O15432 143 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 IFNA2P01563 188 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 IGHV3-7P01780 117 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 GAPDHP04406 335 aaKnown RBP12.6□□□□□ -0.39
CTTN-215ENST00000533931 HLA-DMAP28067 261 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 HRH1P35367 487 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
CTTN-215ENST00000533931 MEF2DQ14814 521 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 PLA1AQ53H76 456 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
CTTN-215ENST00000533931 FAM53AQ6NSI3 398 aaPredicted RBP12.6□□□□□ -0.39
CTTN-215ENST00000533931 ZNF833PQ6ZTB9 187 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 TMEM17Q86X19 198 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 ODF3L1Q8IXM7 274 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 LYG1Q8N1E2 194 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 OR5R1Q8NH85 324 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 BORCS5Q969J3 196 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 ZNF48Q96MX3 618 aaPredicted RBP12.6□□□□□ -0.39
CTTN-215ENST00000533931 S1PR3Q99500 378 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 ZNF221Q9UK13 617 aa12.6□□□□□ -0.39
CTTN-215ENST00000533931 SVEP1Q4LDE5 3571 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 A0A1W2PPE3 182 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 ST8SIA5O15466 376 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 PPYP01298 95 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 FCGR2CP31995 323 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 BRS3P32247 399 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 LUMP51884 338 aaPredicted RBP12.59□□□□□ -0.39
CTTN-215ENST00000533931 HILS1P60008 231 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 SSX2Q16385 188 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 LRRC75BQ2VPJ9 315 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 RNASE12Q5GAN4 147 aaKnown RBP12.59□□□□□ -0.39
CTTN-215ENST00000533931 STEAP1BQ6NZ63 245 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 SIGLECL1Q8N7X8 197 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 OR6F1Q8NGZ6 308 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 RTN4IP1Q8WWV3 396 aaPredicted RBP12.59□□□□□ -0.39
CTTN-215ENST00000533931 ZDHHC16Q969W1 377 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 WDR12Q9GZL7 423 aaKnown RBP12.59□□□□□ -0.39
CTTN-215ENST00000533931 PARP12Q9H0J9 701 aaKnown RBP12.59□□□□□ -0.39
CTTN-215ENST00000533931 DPAGT1Q9H3H5 408 aa12.59□□□□□ -0.39
CTTN-215ENST00000533931 SAA2-SAA4A0A096LPE2 208 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 A0A1W2PPI3 338 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 PMP2P02689 132 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 CD3DP04234 171 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 OR8U9P0C7N5 309 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 AKAIN1P0CW23 69 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 SAA2P0DJI9 122 aaPredicted RBP12.58□□□□□ -0.4
CTTN-215ENST00000533931 NFYAP23511 347 aaPredicted RBP12.58□□□□□ -0.4
CTTN-215ENST00000533931 CD40LGP29965 261 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 GPR12P47775 334 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 RFX2P48378 723 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 TGIF2LXQ8IUE1 241 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 OR8U1Q8NH10 309 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 C17orf50Q8WW18 174 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 C22orf15Q8WYQ4 148 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 MOB3AQ96BX8 217 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 ZNF251Q9BRH9 671 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 CCDC32Q9BV29 185 aa12.58□□□□□ -0.4
CTTN-215ENST00000533931 BTBD17A6NE02 478 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 TCF21O43680 179 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 RAB3DO95716 219 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 IFNA6P05013 189 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 FCER2P06734 321 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 AADACP22760 399 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 FAUP35544 74 aaKnown RBP12.57□□□□□ -0.4
CTTN-215ENST00000533931 IER3P46695 156 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 PPP5CP53041 499 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 HERV-K104P61576 105 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 DYNAPQ8N1N2 210 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 ZNF645Q8N7E2 425 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 ZBTB34Q8NCN2 500 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 OR2D2Q9H210 308 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 ABCB10Q9NRK6 738 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 SLC2A8Q9NY64 477 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 RBM7Q9Y580 266 aaKnown RBP12.57□□□□□ -0.4
CTTN-215ENST00000533931 HILPDAQ9Y5L2 63 aa12.57□□□□□ -0.4
CTTN-215ENST00000533931 SOX21Q9Y651 276 aaPredicted RBP12.57□□□□□ -0.4
CTTN-215ENST00000533931 IGHV1-3A0A0C4DH29 117 aa12.56□□□□□ -0.4
CTTN-215ENST00000533931 CD1BP29016 333 aa12.56□□□□□ -0.4
CTTN-215ENST00000533931 ECI1P42126 302 aa12.56□□□□□ -0.4
CTTN-215ENST00000533931 UCP3P55916 312 aa12.56□□□□□ -0.4
CTTN-215ENST00000533931 RPL15P61313 204 aaKnown RBP12.56□□□□□ -0.4
CTTN-215ENST00000533931 TSPAN5P62079 268 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms