RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 TLE4Q04727 773 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 PXDC1Q5TGL8 231 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 FAM219AQ8IW50 185 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 FOXRED2Q8IWF2 684 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 BATF2Q8N1L9 274 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 BPIFCQ8NFQ6 507 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 PPP1R35Q8TAP8 253 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 C14orf79Q96F83 325 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 TSNAXQ99598 290 aaKnown RBP8.11□□□□□ -1.11
CHKA-207ENST00000533728 FOXC2Q99958 501 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 C1QTNF6Q9BXI9 259 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 SEC11CQ9BY50 192 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 OPN3Q9H1Y3 402 aaPredicted RBP8.11□□□□□ -1.11
CHKA-207ENST00000533728 SMDT1Q9H4I9 107 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 LUZP4Q9P127 313 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 TINAGQ9UJW2 476 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 ZDHHC8Q9ULC8 765 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 FAM215AQ9Y5M1 114 aa8.11□□□□□ -1.11
CHKA-207ENST00000533728 IGLV3-9A0A075B6K5 115 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 A0A1B0GW64 132 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 SRRM5B3KS81 715 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 H0YL77 283 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 HSPB6O14558 160 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 HSPA12AO43301 675 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 ADAM20O43506 726 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 FBXO24O75426 580 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 MED6O75586 246 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 WISP2O76076 250 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 IGLV2-14P01704 120 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 SERPINE2P07093 398 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 GATA4P43694 442 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 TAS2R30P59541 319 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 VAMP2P63027 116 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 NKX6-1P78426 367 aaPredicted RBP8.1□□□□□ -1.11
CHKA-207ENST00000533728 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.11
CHKA-207ENST00000533728 SWI5Q1ZZU3 235 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 Q6ZR03 302 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 SVBPQ8N300 66 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 LFNGQ8NES3 379 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 NINJ1Q92982 152 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 ERGIC1Q969X5 290 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 GALMQ96C23 342 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 MUCL1Q96DR8 90 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 RAB9BQ9NP90 201 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 LAMP3Q9UQV4 416 aa8.1□□□□□ -1.11
CHKA-207ENST00000533728 HCFC1P51610 2035 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 BTBD17A6NE02 478 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 A6NLC8 198 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 WRBO00258 174 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 ITGB1BP1O14713 200 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 DFFBO76075 338 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 SCAF4O95104 1147 aaKnown RBP8.09□□□□□ -1.11
CHKA-207ENST00000533728 LY86O95711 162 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 CRYAAP02489 173 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 CD5P06127 495 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 ADH4P08319 380 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 OR3A1P47881 315 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 ARHGDIBP52566 201 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 RPL23AP62750 156 aaKnown RBP8.09□□□□□ -1.11
CHKA-207ENST00000533728 HTD2P86397 168 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 CATR1Q13166 79 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 MIDNQ504T8 468 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 ZNF474Q6S9Z5 364 aaPredicted RBP8.09□□□□□ -1.11
CHKA-207ENST00000533728 FAM180AQ6UWF9 173 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 DPPA3Q6W0C5 159 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 ZNF66Q6ZN08 573 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 MRGPRGQ86SM5 289 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 TMEM252Q8N6L7 170 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 ZNF645Q8N7E2 425 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 GNPNAT1Q96EK6 184 aaPredicted RBP8.09□□□□□ -1.11
CHKA-207ENST00000533728 WFDC1Q9HC57 220 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 ELOVL5Q9NYP7 299 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 OR1A1Q9P1Q5 309 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 RNF115Q9Y4L5 304 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 MMP24Q9Y5R2 645 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 WSB1Q9Y6I7 421 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.11
CHKA-207ENST00000533728 DSCAMO60469 2012 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 PSPNO60542 156 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 APOC3P02656 99 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 GZMHP20718 246 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 IL2RGP31785 369 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 CEACAM6P40199 344 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 LPAR6P43657 344 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 FABP6P51161 128 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 TDGF1P3P51864 188 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 DVL1P1P54792 670 aaPredicted RBP8.08□□□□□ -1.12
CHKA-207ENST00000533728 POLR2GP62487 172 aaKnown RBP eCLIP8.08□□□□□ -1.12
CHKA-207ENST00000533728 EIF4EBP1Q13541 118 aaPredicted RBP8.08□□□□□ -1.12
CHKA-207ENST00000533728 TMEM30BQ3MIR4 351 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 DRAM1Q8N682 238 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 NUP37Q8NFH4 326 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 IL1F10Q8WWZ1 152 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 GPR146Q96CH1 333 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 SNRNP40Q96DI7 357 aaKnown RBP8.08□□□□□ -1.12
CHKA-207ENST00000533728 LRRC46Q96FV0 321 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 SNX22Q96L94 193 aa8.08□□□□□ -1.12
CHKA-207ENST00000533728 PARD6GQ9BYG4 376 aaPredicted RBP8.08□□□□□ -1.12
CHKA-207ENST00000533728 UQCC1Q9NVA1 299 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms